Table 3. FST scores between pairs of East Asian and European populations at three index SNPs around THADA and on chromosome 7 in the cluster of genes containing GCC1, ARF5, PAX4 and SND1.
FST score | CHB-CEU | CHB-TSI | CHB-MXL | CHD-CEU | CHD-TSI | CHD-MXL | JPT-CEU | JPT-TSI | JPT-MXL |
rs7578597 | – | – | – | 0.057 | 0.024 | 0.004 | – | – | – |
rs10229583 | 0.012 | 0.007 | <0.001 | 0.011 | 0.006 | <0.001 | 0.024 | 0.016 | 0.006 |
rs6467136 | 0.082 | 0.131 | 0.113 | 0.085 | 0.135 | 0.116 | 0.113 | 0.168 | 0.147 |
Population abbreviations represent: CEU – Utah residents with Northern and Western European ancestry from the CEPH collection; CHB – Han Chinese in Beijing, China; CHD – Chinese in Metropolitan Denver, Colorado; JPT – Japanese in Toyko, Japan; MXL – Mexican ancestry in Los Angeles, California; TSI – Toscani in Italia.