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. 2014 Oct 21;14:266. doi: 10.1186/s12866-014-0266-7

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© Knirel et al.; licensee BioMed Central Ltd. 2014

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Genetic structures of the genomic regions franking oacC gene in serotype 6 strains. Sequences of contig NZ_AERO01000013 (strain CDC796-83), NZ_AKMW01000058 (CCH060), and SfII (NC_021857.1) were obtained from NCBI database. The orfs were annotated as submitted sequences in NCBI, and shown as thick arrows. The conserved genes of NZ_AERO01000013 and NZ_AKMW01000058 were shown in different colors: phage original genes, blue; IS629 and IS630, green; oacC, yellow; pseudo, gray; others, black. Genes sharing >95% identity at amino acid level between CDC796-83 and serotype-converting bacteriophage SfII are marked by red shadow. Functional domains of SfII are indicated below. Key primers used for PCR screening are indicated by thin arrows. The locus_tag numbers are showed in the arrows, and the encoded proteins are indicated above.