Table 3. The primers for HAdV-D genome*.
Name | Sequence(5′-3′) |
1s | GTTTCGATTGCGGTGTTTTT |
1a | GGTGTTCTGGCTCCATTTGT |
2s | CTCCTCTATCTCGCCTGGTG |
2a | CACCCTGGACTTGGTCTCAT |
3s | GGGTCTGCCATATCCTGAAG |
3a | TCCCAGCTGTTGAGAAACCT |
4s | ATGCTCCTGGGTGAGATCAT |
4a | CAGGCCAACATCAAATCCTC |
5s | GGTCTGTGCTCGTCCTCACT |
5a | ACGAGGAGCTCAAAAAGCTG |
6s | GGTTAGGCAGAGCGAAAGTG |
6a | GTCGCATCTCGAATGACCTC |
7s | CCCGTGACTTTGAACCTGAA |
7a | ATGGACGACTTCCAGGACAC |
8s | ATGAGCCTCTCGATGTCATCACTGG |
8a | GCCCTCTTCCAAGTCCATCT |
9s | CCAGCCGACTTCTCCAGTTA |
9a | CCTCCTCCTCTTCCTCATCC |
10s | TCAAGGTGCTGACGCTGA |
10a | TCAGACTGTCGGTGTCGTTC |
11s | GTCTGGCCCGGACTACTTTT |
11a | GCTATGGCCTTGGTGAGTTT |
12s | TGGCCAATAACGGGATAGAGAGTC |
12a | GATTCTGAAGCCCTCTTGGAAAGG |
13s | CGGTGACCAAGCTGGTGATGCC |
13a | CGCTTCTTGGCTCCTCCGTACAT |
14s | CTCCCTCACCCACGTCTTC |
14a | AAACTCTACTGCCCCCTCGT |
15s | TCCTCCTCGTCCCTGATCTA |
15a | TAAAGGATGCTGGGGTGGTA |
16s | GTTGCATCCTTCCATCATCC |
16a | GATACTGTGCAGCGTGCTCT |
17s | GGTGGTGGAGATGGAAGATG |
17a | GGGTCTTGTTTGCCATTTGT |
18s | GTACAAGGCGCGCTTCACT |
18a | GTAGGAGTCGGGCAGGTACA |
19s | CATTGAGAATCACGGTGTGG |
19a | GGAGTACATGCGGTCCTTGT |
20s | TTGTCTACTCGGGCTCCATC |
20a | CAAGTTCATGGTGGGGTTTC |
21s | GCACCTGCTACATGTTCGAC |
21a | GCTCAAGTGTCTGCATGGAA |
22s | CGCTGCATATTCGGGTAGAG |
22a | TGTTTCAGCAGCACATCCTC |
23s | CCTAGGGGAAGATGGAGGAG |
23a | TTGTCCAGCTCCTTCAGGTT |
24s | TTCAGACACGGTTTCGTCAG |
24a | TCGATCCCATCTACGAGGAG |
25s | ATGGAAGAAGAATGGGACAGC |
25a | TCTGCAAGGTCAGGTAGGCCTGG |
26s | GCCCACAATCGGGTATAAAA |
26a | CCCACCAGGGAAAGGATAAT |
27s | CGTTTCGGAGGTGAGCTAAG |
27a | GCAGTGTCAGGTTCTGGATG |
28s | AAGCCTTTGTCAGAGCCTCA |
28a | TGCAGTAACATTCCATTCACAG |
29s | GATTGCGGGCTTTGTAACTC |
29a | CCTGTATTCGGGACTGTGGT |
(28–29)s | GATGGCGAACTTAATGATCCA |
(28–29)a | AATGTTGGCAGTGGCAGTAA |
30s | CAGTAATCGGGGAACCTCAG |
30a | TGTGGACCAGGAATTTGACA |
31s | CTCCCTCCTCAAGACCCTTT |
31a | GTGGTAGGTTTTGGATACGC |
32s | AGGTGGCGGCTTATCATTTA |
32a | CATCTGGTACGATGGTCACG |
33s | CACAGCCTTCAGCATCAGTC |
33a | CCAAGGCTGGAAAAATGAGA |
34s | CTCTACGCGTACATCCAGCA |
34a | AAGTGAGAACGCGGAAGTGT |
35s | GTGGAAAGATTCAGGGCAAA |
35a | AAGCGGTGATGCAAATGAC |
36s | TGCAAATGAGCTTTTGAATTTT |
36a | TCTCTACTCGCTGGCACTCA |
* All the primers were designed to amplify whole genome (except the 3′ and 5′ termination (GenBank accession number: HM770721).