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. 2014 Oct 24;9(10):e111552. doi: 10.1371/journal.pone.0111552

Table 1. Amino acid sequence divergence (%) of p24 in VLP panel and LANL reference subtypes after pairwise sequence alignment.

VLP panel LANL reference subtypes
n p24 n p24
A1 5 8.0±1.9 3 8.3±1.6
B 7 5.4±1.6 4 3.3±1.9
C 5 6.1±0.9 4 5.2±1.8
D 4 7.6±3.9 4 4.1±1.2
CRF12_BF 4 6.5±2.3 3 3.6±0.3
F2 1 N/A N/A N/A
G 4 6.7±1.8 4 4.6±2.8
CRF20_BG 1 N/A N/A N/A
H 1 N/A N/A N/A
CRF01_AE 4 4.7±1.8 3 4.1±1.3
CRF02_AG 5 8.3±1.9 3 4.3±0.9
group O 2 8.2 4 8.3±1.3
weighted average 6.7±1.2 5.1±1.8

N/A  =  not applicable; n =  number of sequences.