Table 6.
GSEA using transcriptome data of CD4+ or CD8+ T cells from AIDS patients.
| Group comparison1 | THP1r2Mtb-induced | TMtb-iNet | TMtb-iEx | ||||||
|---|---|---|---|---|---|---|---|---|---|
| NES2 | FDR3 | Relevance3 | NES2 | FDR3 | Correlation3 | NES2 | FDR3 | Correlation3 | |
| CD4_acute HIV versus CD4_HC | 2.61 | 0.000 | Positive | 2.82 | 0.000 | Positive | 1.75 | 0.000 | Positive |
| CD4_chronic HIV versus CD4_HC | 3.06 | 0.000 | Positive | 3.35 | 0.000 | Positive | 1.59 | 0.006 | Positive |
| CD4_nonprogressor HIV versus CD4_HC | −0.70 | 1.000 | Null | −0.66 | 1.000 | Null | −0.62 | 1.000 | Null |
| CD8_acute HIV versus CD8_HC | 2.59 | 0.000 | Positive | 2.78 | 0.000 | Positive | 1.46 | 0.013 | Positive |
| CD8_chronic HIV versus CD8_HC | 2.70 | 0.000 | Positive | 3.34 | 0.000 | Positive | −0.75 | 0.912 | Null |
| CD8_nonprogressor HIV versus CD8_HC | 1.73 | 0.000 | Positive | 1.87 | 0.000 | Positive | 1.13 | 0.127 | Null |
1Acute HIV: early infection; chronic HIV: chronic, no treatment; nonprogressor: long-term nonprogressor.
2,3The same as Table 1.