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. Author manuscript; available in PMC: 2015 Aug 1.
Published in final edited form as: J Immunol. 2014 Jun 23;193(3):1427–1439. doi: 10.4049/jimmunol.1302048

Table 1.

Peptide eluted from T23 and T11

Sequence Start
amino
acid
Length T23
Hits
T11
Hits
Accession Name
VMAPRTLIL 3 9 6 0 P04222 HLA class I histocompatibility antigen, Cw-3 alpha chain
VMAPRTLVL 3 9 3 1 P01892 HLA class I histocompatibility antigen, A-2 alpha chain precursor
KLFGSTSSF 195 9 4 0 P08174 Complement decay-accelerating factor
SAIPHPLIM 226 9 4 0 P61201 COP9 signalosome complex subunit 2
VFGPILASLL 166 10 3 0 O43147 Small G protein signaling modulator 2
ETYPDAVKI 182 9 3 0 Q8WV22 Non-structural maintenance of chromosomes element 1 homolog
FVPAEKIVI 301 9 3 0 Q9UHF4 Interleukin-20 receptor subunit alpha
AKYPEIKSL 28 9 2 0 O15121 Sphingolipid delta(4)-desaturase DES1
AAFHEEFVV 217 9 2 0 P51114 Fragile X mental retardation syndrome-related protein 1
AQLPEKVEY 986 9 2 0 P51532 Transcription activator BRG1
LPMFIIVV 308 8 2 0 P53794 Sodium/myo-inositol cotransporter
GQLPGLHEY 561 9 2 0 Q8TAT6 Nuclear protein localization protein 4 homolog
FGFHKPKMY 2 9 2 0 Q9NP50 Protein FAM60A
YAYDGKDYIA 140 10 1 0 P01892 HLA class I histocompatibility antigen, A-2 alpha chain
YAYDGKDYIAL 140 11 1 0 P01892 HLA class I histocompatibility antigen, A-2 alpha chain
RKLEAAEDIAY 239 11 1 0 P35232 Prohibitin
FAYPAIRYL 117 9 1 0 P51398 28S ribosomal protein S29, mitochondrial
HSAEILAEI 75 9 1 0 Q6FI81 Anamorsin
HDLIRVVY 155 8 1 0 Q8IXS8 Protein FAM126B
AAFAYTVKY 243 9 1 0 Q8N2K1 Ubiquitin-conjugating enzyme E2 J2
HTANIQTLI 313 9 1 0 Q8NG31 Protein CASC5
LAAQILAVL 202 9 1 0 Q96IK0 Transmembrane protein 101
SKLPIGDVATQY 291 12 1 0 Q99832 T-complex protein 1 subunit eta
SLINEFKL 147 8 1 0 Q9NYW6 Taste receptor type 2 member 3
RAFDQGADAIY 34 11 1 0 Q9UDW1 Cytochrome b-c1 complex subunit 9
GKAPLNVQF 876 9 3 1 O75369 Filamin-B
AAFLKAIGY 744 9 3 1 O75533 Splicing factor 3B subunit 1
SAIDRIFTL 403 9 4 2 Q86TU7 Histone-lysine N-methyltransferase setd3
TASPLVKSV 866 9 3 1 Q6P4F7 Rho GTPase-activating protein 11A
NIFRNVEV 80 8 3 2 Q7L523 Ras-related GTP-binding protein A
AAFDKIQQL 121 9 3 2 Q9P2I0 Cleavage and polyadenylation specificity factor subunit 2
SAKTPGFSV 143 9 2 1 Q9NY61 Protein AATF
ISTPVIRTF 989 9 2 1 Q9NZB2 Constitutive coactivator of PPAR-gamma-like protein 1
MTPEIIQKL 168 9 2 2 Q9UMS4 Pre-mRNA-processing factor 19
SAVPFKILY 1030 9 1 1 P10586 Receptor-type tyrosine-protein phosphatase F
ALIEFIRSEY 355 10 1 1 P26639 Threonine--tRNA ligase, cytoplasmic
ETFNTPAMYV 825 10 1 1 Q6S8J3 POTE ankyrin domain family member E
AAMPRPVSY 576 9 1 1 Q6TFL4 Kelch-like protein 24
EDDNISVTI 239 9 1 1 Q9NWH9 SAFB-like transcription modulator
RQADFVQVL 414 9 1 1 Q9Y2V7 Conserved oligomeric Golgi complex subunit 6
EIFADPRTV 228 9 1 2 Q92871 Phosphomannomutase 1
AQRMTTQLL 2 9 0 1 P15328 Folate receptor alpha
AASSIQRVL 124 9 0 1 Q5BKT4 Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-
glucosyltransferase
QAVAKCAQLL 336 10 0 1 Q6ZU64 Coiled-coil domain-containing protein 108
DVIYPMAVV 177 9 0 2 P78406 mRNA export factor
GAFGKPSSL 442 9 0 2 Q8IVT2 Uncharacterized protein C19orf21
VAAPQVQQV 231 9 0 3 Q12772 Sterol regulatory element-binding protein 2