Table 3.
ROC analyses of the effectiveness of two measures of protein similarity in classifying proteins in CATH classes, architectures, and folds.
FASTA on native sequences |
STRUCTAL on 3D sequence traces |
|||||
---|---|---|---|---|---|---|
Dataset | Classa | Architecturea | Folda | Class | Architecture | Fold |
CATH2930 | 0.53b | 0.54 | 0.57 | 0.56 | 0.55 | 0.62 |
CATH35_e-4 | 0.53 | 0.53 | 0.56 | 0.56 | 0.54 | 0.61 |
Results are given at three levels of the CATH hierarchy.
Area under the ROC curve.