Table 2.
A. glaucus coding sequences expressed during growth on 3 M NaCl. One hundred cDNA clones were randomly selected and sequenced.
| A. glaucus unigenes | Annotation (based on similarity to database sequences) |
|---|---|
| 0307, 23171 | RRM superfamily, nuclear and cytoplasmic polyadenylated RNA-binding protein pub1 |
|
| |
| 2229, 2243, 23119, and 0501 | ZIP zinc/iron transport family, plasma membrane low affinity zinc ion transporter |
|
| |
| 0508, 2247, 2372, 2390, 0209, 2302, 2341, 2380, 2382, 23144, 23151, 23159, and 2378 | Ribosomal_L27e superfamily, 60S ribosomal protein L27e |
|
| |
| 0509, 23136, and 2018 | Similar to alpha/beta hydrolase fold-3 domain containing protein |
|
| |
| 0314 | Six-hairpin glycosidase |
|
| |
| 1402, 2037, and 2113 | 4HTB_3 (beta-hydroxydecanoyl-acyl carrier protein-(ACP-) dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) |
|
| |
| 1408, 23140, and 23134 | RNase_PH superfamily, exosome complex endonuclease 2/ribosomal RNA processing protein |
|
| |
| 2250 | MFS general substrate transporter (secondary transporters that include uniporters, symporters, and antiporters) |
|
| |
| 2330 | Casein kinase II beta 2 subunit |
|
| |
| 2334 | Putative intracellular protease/amidase |
|
| |
| 2354, 23179, 2042, 2048, 2142, and 2263 | DUF3431 superfamily |
|
| |
| 2362 | WD repeat protein (adaptor/regulatory modules in signal transduction, Pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11–24 residues) |
|
| |
| 23131 | p450 superfamily, cytochrome P450 [secondary metabolites biosynthesis, transport, and catabolism/methylsterigmatocystin oxidoreductase] |
|
| |
| 23149 | PF03619 domain protein (organic solute transporter Ostalpha) |
|
| |
| 23207 | WD40 superfamily. Nuclear pore complex subunit (adaptor/regulatory modules in signal transduction) |
|
| |
| 2265 | Spore germination lipase lipC |
|
| |
| 2251 | Family 2 glycosyl transferase |
|
| |
| 2258 | Phosphoprotein |
|
| |
| 0203 | 7 transmembrane receptors |
|
| |
| 2301 | Exodeoxyribonuclease V subunit beta |
|
| |
| 2302, 2304 | Protein CRE_17637 |
|
| |
| 2305 | Aspartic proteinase nepenthesin-1-like |
|
| |
| 2306 | Carnitine acetyl transferase |
|
| |
| 2339 | TIM_phosphate_binding superfamily, nucleoporin SONB |
|
| |
| 2377 | PDI_b_family, PDI_a_family (thioredoxin_like superfamily), disulfide-isomerase precursor |
|
| |
| 2383, 23163 | MDR superfamily, delta-aminolevulinic acid dehydratase |
|
| |
| 23103 | PING superfamily, regulator of gluconeogenesis Rmd5 |
|
| |
| 23104 | Fasciclin superfamily, fasciclin domain family protein |
|
| |
| 23120 | Lactamase_B superfamily, Zn-dependent hydrolases of the beta-lactamase fold |
|
| |
| 23135 | NADH dehydrogenase subunit 1 |
|
| |
| 23187 | Rho_GDI superfamily (rho-gdp dissociation inhibitor) |
|
| |
| 23189 | P-loop NTPase domain superfamily (ras-like GTP-binding protein) |
|
| |
| 2397 | SocE |
|
| |
| 2253, 2227, 2214, 2242, 2369, 23156, 23197, 0215, 0217, and 2346 | DJ-1/PfpI family protein (Type 1 glutamine amidotransferase- (GATase1-) like domain) |
|
| |
| 2252 | Isonitrile hydratase |
|
| |
| 22651, 2375, 23102, 23143, 23160, 23168, 23191, and 2248 | 4-Methyl-5 (B-hydroxyethyl)thiazole monophosphate biosynthesis protein |
|
| |
| 2243 | Zinc/iron permease |
|
| |
| 22652, 2389, and 2246 | Unknown; no similar proteins found |