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. Author manuscript; available in PMC: 2014 Oct 29.
Published in final edited form as: Subcell Biochem. 2013;66:267–295. doi: 10.1007/978-94-007-5940-4_10

Table 10.1.

Zur and RicR regulons are differentially regulated in mpa and pafA mutants when compared to wild type Mtb (Adapted from [98])

CDC1551a H37Rva Gene Name/functionb mpac pafAc
Zur regulond MT0115 Rv0106 Conserved hypothetical protein. Unknown function 3.25 4.21
MT0292 Rv0280 ppe3 PPE family protein. Unknown function. Unknown function 3.85 4.1
MT0293 Rv0281 Conserved hypothetical protein. Possible methlytransferase 1.94 2.46
MT0295 Rv0282 Conserved hypothetical protein. Unknown function 2.15 2.49
MT0296 Rv0283 Possible conserved membrane protein. Unknown function 2.06 2.34
MT0297 Rv0284 Possible conserved membrane protein. Unknown function 2.33 2.51
MT0298 Rv0285 pe5 PE family protein. Unknown function 1.91 2.19
MT0299 Rv0286 ppe4 PPE family protein. Unknown function 1.85 2.16
MT0300 Rv0287 esxG ESAT-6 like protein. Unknown function 1.61 2.1
MT0302 Rv0289 Conserved hypothetical protein. Unknown function 2 2.2
MT0303 Rv0290 Probable conserved transmembrane protein. Unknown function 1.94 1.96
MT035 Rv0292 Probable conserved transmembrane protein. Unknown function 1.89 2.13
MT2115 Rv2055c rpsR2 Probable ribosomal protein S18. involved in translation, amino-acyl tRNA binding 2.65 3.81
MT2117 Rv2056c rpsN2 Probable ribosomal protein S14. Involved in translation 2.43 4.21
MT2117.1 Rv2057c rpmG1 Probable ribosomal L33. Involved in translation 2.91 4.2
MT2118 Rv2058c rpmB2 Probable 50S ribosomal protein L28. Involved I ribosome activity 3.47 6.12
MT2119 Rv2059 Conserved hypothetical protein. Unknown function n.i 2.17
MT2428 Rv2359 zur Zinc uptake regulator (formally furB) 0.54 0.94
RicR regulone MT0196 Rv0186a mymT Metallothionein 0.71 0.47
MT0200 Rv0190 ricR Regulated in copper repressor n.i. n.i.
MT0870 Rv0847 lpqS Probable lipoprotein. Unknown function 0.52 0.33
socA small ORF. Unknown function n.i. n.i.
MT1746.1 socB small ORF. Unknown function n.i. n.i.
MT3039 Rv2963 Probable integral membrane protein. Unknown function 0.6 0.38
a

Locus number in Mtb strains CDC1551 and H37Rv

b

Functional annotations are taken from http://genolist.pasteur.fr/TubercuList/

c

Numbers represent expression in pafA and mpa strains relative to wild type Mtb H37Rv grown to early stationary phase in 7H9 media, as determined by microarray analysis. n.i: not-identified in the microarray [98]

d

Zur regulon is described in detail elsewhere [99]

e

RicR regulon is described in detail elsewhere [98]