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. 2014 Sep 12;26(9):3556–3568. doi: 10.1105/tpc.114.130120

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© 2014 American Society of Plant Biologists. All rights reserved.

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Figure 6. — DNA Methylation Differences Are Prominent on Long Heterochromatic TEs.

(A) Box plots showing absolute fractional CHH demethylation of 50-bp windows within transposons; numbers on x axis represent length of TEs in kilobases.

(B) Box plots showing absolute fractional CHG (left panel) and CHH (right panel) demethylation of 50-bp windows within euchromatic and heterochromatic TEs. TEs with H3K9m2 log2 scores lower than −1 and higher than 1 are considered euchromatic and heterochromatic, respectively.

(C) CHH methylation levels are plotted as in Figure 4 for TEs belonging to four distinct families.