Table 1. Single Nucleotide Polymorphisms distinguishing the wild type (WT) and the evolved strain (Evo).
| Chromo-some | Position | Ref1 | WT | Evo | Gene | Effect | Validation2 |
| Cagl0C | 90189 | C | C | T | Intergenic | − | |
| Cagl0C | 90588 | G | G | A | Intergenic | − | |
| Cagl0C | 90591 | T | T | C | Intergenic | − | |
| Cagl0I | 140684 | A | A | G | CAGL0I01672g/HUL4 | Synonymous | + |
| Cagl0I | 433355 | T | T | G | CAGL0I04818g/CHS2 | Asn→Lys | + |
| Cagl0J | 80904 | C | C | T | CAGL0J00781g/NSP1 | Asp→Asn | / |
| Cagl0J | 247572 | T | A | T | CAGL0J02508g/AWP1 | Synonymous | − |
| Cagl0K | 662359 | G | G | A | CAGL0K06787g/PYC2 | Arg→Cys | + |
| Cagl0M | 163650 | T | C | T | Intergenic | − |
1
Reference genome [28].
2
Validation of mutations in predicted open reading frames by individual sequencing.
+mutation validated,/no sequence obtained, −differences between Sanger sequence and genome sequencing.