Table 2. Genotype distributions in 985 aspirin-treated patients with stable coronary artery disease.
Gene | Gene product | Nucleotide change1 | Ref SNP ID2 | Minor allele | MAF | Call rate, % | Hardy-Weinberg equilibrium3 |
ITGB3 | GP IIIa | PlA1/A2 (T1565→C) | rs5918 | C | 0.17 | 98.8 | 0.98 |
PTGS1 | COX-1 | A-842→G/C50→T | rs10306114 | G | 0.07 | 98.8 | 0.72 |
PTGS1 | COX-1 | C22→T | rs1236913 | T | 0.08 | 98.8 | 0.34 |
TBXA2R | TXA2 receptor | C924→T | rs4523 | A | 0.33 | 98.6 | 1.0 |
TBXA2R | TXA2 receptor | C795→T | rs1131882 | A | 0.14 | 98.6 | 0.96 |
P2RY1 | P2Y1 | C893→T | rs1065776 | T | 0.04 | 98.6 | 0.98 |
P2RY1 | P2Y1 | A1622→G | rs701265 | G | 0.14 | 98.8 | 1.0 |
P2RY12 | P2Y12 | H2 haplotype | rs68096994 | A | 0.15 | 98.5 | 0.35 |
P2RY12 | P2Y12 | H2 haplotype | rs10935838d4 | A | 0.15 | 96.3 | 0.35 |
P2RY12 | P2Y12 | H2 haplotype | rs20469344 | G | 0.18 | 98.5 | 0.008 |
GP1BA | GP Iba | C145→T (HPA-2) | rs6065 | T | 0.07 | 98.6 | 0.90 |
GP6 | GP VI | T13254→C | rs1613662 | G | 0.17 | 98.6 | 0.94 |
PLA2G7 | Platelet-activating factor acetylhydrolase | G994→T | rs1051931 | A | 0.21 | 96.8 | 0.84 |
F13A1 | Coagulation factor XIII | G34→T | rs5985 | A | 0.26 | 98.6 | 0.78 |
PEAR1 | Platelet endothelial aggregation receptor-1 | A→G | rs12041331 | A | 0.08 | 97.1 | 0.98 |
PEAR1 | Platelet endothelial aggregation receptor-1 | A→C | rs2768759 | A | 0.26 | 98.6 | 0.38 |
Nucleotide change or alternative name as most often termed in the existing literature. 2According to the NCBI SNP database, dbSNP: http://www.ncbi.nlm.nih.gov/projects/SNP/ (accessed on August 15, 2014). 3P-values refer to the goodness-of-fit χ2 test for deviation from the Hardy-Weinberg equilibrium. 4Included in the H1/H2 haplotype constituted by rs10935838, rs2046934, rs5853517, and rs6809699 [35]. COX: cyclooxygenase, GP: glycoprotein, MAF: minor allele frequency, SNP: single nucleotide polymorphism, TXA2: thromboxane A2.