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. Author manuscript; available in PMC: 2015 Dec 1.
Published in final edited form as: Curr Treat Options Oncol. 2014 Dec;15(4):644–657. doi: 10.1007/s11864-014-0310-8

Table 1.

Characteristics of targetable mutations in NSCLC and active clinical trials

Gene Frequency
(%)*
Predominant
histology
Mechanism Detection
method
Clinical
trials
ROS1
[7,4,15,16]
1–2% AdenoCA Fusion FISH, NGS,
PCR
NCT01945021
NCT02186821
NCT02183870
NCT02097810
NCT01970865
NCT01964157
NCT02034981
NCT01922583
RET
[11,16,22]
1.2–2% AdenoCA Fusion FISH, NGS,
PCR
NCT01813734
NCT01639508
NCT01823068
NCT01829217
NCT01877083
NCT01831726
NCT01582191
NCT01922583
NCT02029001
NTRK1
[28]
<0.5% AdenoCA Fusion FISH, NGS,
PCR
NCT02048488
NCT02097810
NCT01804530
MET
[15,32,33]
1–4% AdenoCA Gene
amplification,
(exon 14
splicing)
IHC, PCR,
FISH
NCT02132598
NCT01610336
NCT01911507
NCT01324479
NCT02154490
NCT01039948
NCT00585195
NCT01014936
NCT02055066
NCT01472016
NCT01253707
NCT01468922
NCT01773018
FGFR
[36,37]
10–20% SCC Gene
amplification,
(Fusion)
SNP array,
FISH, IHC,
qPCR
NCT01831726
NCT01935336
NCT02160041
NCT01004224
NCT01948297
NCT01795768
NCT01283945
NCT02109016
NCT01976741
NCT02052778
NCT01868022
NCT02154490
NCT01676714
NCT02133157
NCT02117167
HER2
[33,4951]
1–3% AdenoCA Insertion/deletion PCR, direct
sequencing,
mass
spectrometry
NCT01922583
NCT02029001
NCT01827267
NCT01542437
NCT02183883
NCT01148849
NCT01526473
NCT02117167
NCT01306045
BRAF
[33,55]
1–3% AdenoCA Point mutation
(Fusion)
PCR, direct
sequencing,
MALDI-TOF,
mass spec,
SSCA, HRMA
NCT01531361
NCT01306045
NCT01922583
NCT02029001
NCT01336634
NCT02012231
NRG1
[62]
3.9% Mucinous
AdenoCA
Fusion RT-PCR,
FISH, gene
copy number,
transcriptome
sequencing
None

AdenoCA, adenocarcinoma; FISH, fluorescence in situ hybridization; NGS, next generation sequencing; PCR, polymerase chain reaction; IHC, immunohistochemistry; SNP, single nucleotide polymorphism; qPCR, quantitative PCR; MALDI-TOF, matrix-assisted laser desorption/ionization time of flight; Mass spec, mass spectrometry; SSCA, single strand conformational analysis; HRMA, high-resolution melting analysis; RT-PCR, reverse transcriptase PCR.

*

Frequencies listed are derived from individual studies with different cohort characteristics and therefore are not comparable across mutation type.