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. 2014 Nov 3;9(11):e111710. doi: 10.1371/journal.pone.0111710

Table 4. Effect of dietary treatment, fraction and primer and their interactions on relative abundance of rumen bacterial taxa at the genus level.

Bacterial taxa Individual effect Interactions
P T F PxT PxF TxF PxTxF
Bacteroidetes; BS11 *** *** *** *** NS *** NS
Bacteroidetes; Bacteroidaceae; BF311 *** *** *** *** NS NS NS
Bacteroidetes; Porphyromonadaceae; Parabacteroides * ** NS *** NS NS NS
Bacteroidetes; Prevotellaceae; Prevotella *** *** *** *** *** *** -
Bacteroidetes; RF16 * *** *** - *** *** NS
Bacteroidetes; S24.7 *** *** *** NS *** *** NS
Bacteroidetes; Paraprevotellaceae; CF231 *** *** *** *** ** NS NS
Bacteroidetes; Paraprevotellaceae; YRC22 *** *** *** ** - *** -
Bacteroidetes; Sphingobacteriaceae; Sphingobacterium * *** * *** * *** **
Bacteroidetes; Rhodothermaceae; Rubricoccus * * ** NS * * NS
Fibrobacteres; Fibrobacteraceae; Fibrobacter *** *** *** *** *** *** ***
Firmicutes; Christensenellaceae; Christensenella *** *** *** *** *** *** ***
Firmicutes; Clostridiaceae; 02d06 *** *** *** *** *** NS NS
Firmicutes; Clostridiaceae; Clostridium *** *** *** *** *** *** ***
Firmicutes; Dehalobacteriaceae; Dehalobacterium *** *** *** *** * * ***
Firmicutes; Lachnospiraceae; Butyrivibrio *** *** ** *** * - NS
Firmicutes; Lachnospiraceae; Clostridium ** - - ** NS NS *
Firmicutes; Lachnospiraceae; Coprococcus *** *** NS *** * - NS
Firmicutes; Lachnospiraceae; Moryella *** *** *** * *** NS NS
Firmicutes; Lachnospiraceae; Pseudobutyrivibrio *** *** *** ** *** *** NS
Firmicutes; Lachnospiraceae; Syntrophococcus *** - ** * *** ** *
Firmicutes; Ruminococcaceae; Oscillospira *** *** *** ** *** *** NS
Firmicutes; Ruminococcaceae; Ruminococcus *** *** NS *** * * NS
Firmicutes; Veillonellaceae; Anaerovibrio *** *** * *** *** *** NS
Firmicutes; Veillonellaceae; Mitsuokella ** ** ** *** * * **
Firmicutes; Veillonellaceae; Schwartzia *** *** *** *** *** *** ***
Firmicutes; Veillonellaceae; Selenomonas *** *** *** *** *** *** -
Firmicutes; Veillonellaceae; Succiniclasticum *** *** *** *** NS *** -
Lentisphaerae; R4.45B *** *** *** *** *** *** ***
Proteobacteria; Caulobacteraceae; Mycoplana *** *** ** *** *** *** ***
Proteobacteria; Desulfovibrionaceae; Desulfovibrio *** *** *** *** *** *** ***
Proteobacteria; Succinivibrionaceae; Ruminobacter *** *** * *** * * NS
Proteobacteria; Succinivibrionaceae; Succinivibrio *** *** *** *** *** *** ***
Tenericutes; Anaeroplasmataceae; Anaeroplasma *** *** *** ** *** *** **
Verrucomicrobia; RFP12 *** *** *** *** *** *** ***

P: primer; T: treatment; F: fraction; NS: Non-significant;

***: P<0.001;

**: P<0.01;

*: P<0.05.