Skip to main content
. 2014 Nov 4;9(11):e110741. doi: 10.1371/journal.pone.0110741

Table 1. Cloning efficiency and functional retention of T cell clones.

Stimulus T cell Subset Wells Seeded Established Clonesa IFN-γ+ clonesb Functional clonesd
LCL CD4+ 234 62 (26%) 5/5c 15/65 (23%)
CD8+ 246 116 (47%) 9/107 (8%) 15/126 (12%)
CMV pp65 CD4+ 250 87 (35%) 41/87 (47%)
CD8+ 230 66 (29%) 19/66 (29%)
A02-M CD4+ 114 32 (28%) 19/31 (61%)
CD8+ 162 57 (35%) 23/63 (37%) 23/63 (37%)
D14-M CD4+ ND ND ND ND
CD8+ 288 227 (79%) 221/288 (77%) 267/288 (93%)
a

Number of growing clones, percentage of wells seeded in brackets.

b

Number of clones producing>100 pg/ml more IFN-γ in response to autologous/antigen loaded autologous targets than to control targets, as a fraction of total clones tested; percentage in brackets. In some cases clones that did not proliferate long term were tested, so the denominator is different to the number of established clones.

c

CD4+ clones from LCL stimulation were pre-selected from a subset which were positive for antigen-stimulated proliferation, and thus may not be representative of the 62 proliferating clones.

d

Clones were tested for cytolytic activity (CD8+ clones from LCL and melanoma stimulation only), IFN-γ production (CD4+ and CD8+ clones from each stimulation), or proliferation (CD4+ LCL clones only). Data represent number of clones with any significant response to autologous antigen, as a fraction of total number of clones tested.

ND, not done; – indicates no test additional to IFN-γ production was performed.