Table 3. Novel miRNA candidates identified from tube foot of sea cucumber.
Provisional ID | miRDeep2 score | Read counts | miRNA sequences | Consensus precursor sequence |
Scaffold2497_1173 | 3.5e+3 | 6,984 | caucgccaccaaguguacuuca | caucgccaccaaguguacuucaguggacauaugucguuuuuaaaucugagcacacuugguagcggug |
Scaffold912_781 | 6.6e+2 | 1,292 | cuuucuguggcugucguguuaag | cuuucuguggcugucguguuaagugugauucuaugaagacacuucacacacaaccacaggaaguu |
Scaffold1753_1055 | 3.1e+1 | 58 | gcaguggcuccuauuggucauu | aguccaauagggagggcauugcaggugauauuugaaagcccugcaguggcuccuauuggucauu |
Scaffold759_703 | 2.5e+1 | 47 | uuugguccccuucaaccagccgu | agcugguaaacgggaaccaaaucgugaaguaaaugcggauuugguccccuucaaccagccgu |
Scaffold690_666 | 2.2 | 160 | gugagcggugggguggu | cgcccccugaaccccacgccaauuagugaccugccagugucacaauuagguagugagcggugggguggu |
Scaffold2466_1170 | 1.5 | 210 | uucgaugucggcucuuc | gguugcuuguugcuauccuucgaugucggcucuuc |