Table 1. Transcriptome sequencing data quality.
Sample | Raw reads | Clean reads | Clean bases | Error (%) | Q20 (%) | Q30 (%) | GC (%) |
JA-CMS at the SS stage | 66695222 | 64995444 | 6.50 Gb | 0.03 | 98.05 | 93.60 | 43.79 |
JA-CMS at the MS stage | 77998708 | 75844362 | 7.58 Gb | 0.03 | 98.02 | 93.57 | 43.65 |
JB at the SS stage | 71264156 | 69566718 | 6.96 Gb | 0.03 | 98.01 | 93.45 | 43.74 |
JB at the MS stage | 62779022 | 61431768 | 6.14 Gb | 0.03 | 98.11 | 93.71 | 43.75 |
Notes: Gb = Giga base pair; Q20 represents an error rate of 1 in 100, with a corresponding call accuracy of 99%; Q30 represents an error rate of 1 in 1000, with a corresponding call accuracy of 99.9%.