Table 5.
Total number of DArT markers mapped in sugarcane and aligned to each sorghum chromosome using the BLASTN algorithm
| Sorghum bicolour chromosomes | Total number of DArT markers | Total number of DArT markers on the map | Total no. of unique DArT markers on the Q165 map | Hits to NCBI of mapped DArTs | Number of mapped DArT markers that are not genes | Number with no hit to NCBI | Percent of DArT markers mapped that are genes |
|---|---|---|---|---|---|---|---|
| Sb1 |
553 |
128 |
105 |
23b (32)a |
62 (76) |
20 |
27 |
| Sb2 and Sb8 |
426 (Sb2) 250 (Sb8) |
134 |
113 |
33 (45) |
56 (65) |
24 |
37 |
| Sb3 |
449 |
75 |
61 |
20 (28) |
38 (44) |
3 |
34 |
| Sb4 |
395 |
126 |
99 |
38 (54) |
52 (63) |
9 |
42 |
| Sb5 and Sb6 |
247 (Sb5) 307 (Sb6) |
198 |
154 |
28 (30) |
100 (142) |
26 |
22 |
| Sb7 |
252 |
94 |
82 |
24 (27) |
47 (56) |
11 |
34 |
| Sb9 |
252 |
107 |
86 |
27 (40) |
51 (59) |
8 |
35 |
| Sb10 |
320 |
89 |
72 |
23 (37) |
35 (38) |
14 |
40 |
| No hits |
1783 |
|
|
|
|
|
|
| Super contigs |
44 |
|
|
|
|
|
|
| Total | 5278 | 951 | 772 | 216 | 441 | 115 | 34 |
atotal number of individual DArT markers.
btotal number of unique markers.