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. 2014 Jul 24;14:201. doi: 10.1186/s12870-014-0201-y

Table 1.

Summary of sequences analysis

Sample Raw reads Clean reads Clean bases Error (%) Q20 (%) Q30 (%) GC (%)
Root1_1
22398042
20461257
3.07G
0.05
98.03
93.18
44.28
Root1_2
22398042
20461257
3.07G
0.05
97.66
92.42
44.31
Shoot1_1
20428709
17569959
2.64G
0.05
98.40
94.19
45.32
Shoot1_2
20428709
17569959
2.64G
0.07
95.79
86.91
45.37
Root2_1
24059986
21610426
3.24G
0.05
97.88
92.69
44.37
Root2_2
24059986
21610426
3.24G
0.06
96.99
90.46
44.42
Shoot2_1
20592635
17355269
2.6G
0.05
98.31
93.91
45.52
Shoot2_2
20592635
17355269
2.6G
0.09
94.30
83.15
45.58
Summary 174958744 153993822 23.1G        

Root1: Controlled root.

Root2: Treated root.

Root1_1: Reads sequencing of controlled root from the left.

Root1_2: Reads sequencing of controlled root from the right.

Q20: The percentage of bases with a Phred value >20.

Q30: The percentage of bases with a Phred value >30.