Table 1.
Summary of microsatellite markers, number of alleles, cumulative number of haplotypes and expected heterozygosity (HE) at each marker for Plasmodium falciparum and Plasmodium vivax isolates collected in Temotu Province
| Locus | Chromosome location | Dye | n | No of alleles | H E | Cumulative number of haplotypes | |
|---|---|---|---|---|---|---|---|
|
Pf |
Polyα |
4 |
PET |
45 |
7 |
0.52 |
7 |
| PfPK2 |
12 |
NED |
43 |
7 |
0.52 |
16 |
|
| TAA87 |
6 |
VIC |
45 |
5 |
0.59 |
17 |
|
| TAA81 |
5 |
VIC |
45 |
5 |
0.71 |
19 |
|
| TA1 |
6 |
6FAM |
41 |
4 |
0.27 |
19 |
|
| TAA60 |
13 |
NED |
44 |
4 |
0.55 |
19 |
|
| ARA2 |
11 |
PET |
45 |
4 |
0.70 |
19 |
|
| TAA109 |
6 |
6FAM |
44 |
3 |
0.46 |
19 |
|
| Mean ± SE |
|
|
45 |
4.88 ± 0.51 |
0.54 ± 0.05 |
|
|
| Pv | MS8 |
12 |
VIC |
60 |
20 |
0.94 |
20 |
| Pv3.27 |
3 |
6FAM |
66 |
16 |
0.88 |
42 |
|
| MS16 |
9 |
NED |
61 |
15 |
0.87 |
54 |
|
| MS10 |
13 |
PET |
58 |
12 |
0.89 |
54 |
|
| MS5 |
6 |
NED |
47 |
9 |
0.83 |
58 |
|
| msp1F3 |
7 |
VIC |
62 |
7 |
0.79 |
58 |
|
| MS1 |
3 |
6FAM |
48 |
5 |
0.75 |
58 |
|
| Mean ± SE | 67 | 12 ± 2.02 | 0.85 ± 0.02 |