TABLE 1.
Sequencing and annotation results of the five cave bacteria isolated from two sites within the Lechuguilla Cave in the Carlsbad Caverns National Park, NMa
| Strain | Source (depth in m) | BioProject no. | Biosample no. | Accession no. | Organism | Genome coverage (×) | Genome size (bp) | No. of contigs | No. of ORFs | No. of tRNAs | No. of rRNAs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| LC5 | LCEAE (−347) | PRJNA248423 | SAMN02798393 | JNNO00000000 | Devosia sp. | 65 | 4,202,991 | 47 | 4,117 | 48 | 6 |
| LC81 | LCEAE (−347) | PRJNA248597 | SAMN02799681 | JNFD00000000 | Sphingopyxis sp. | 104 | 4,397,290 | 48 | 4,111 | 44 | 3 |
| LC85 | LCEAE (−347) | PRJNA248600 | SAMN02799685 | JPKG00000000 | Bosea sp. | 47 | 6,564,029 | 74 | 6,193 | 51 | 3 |
| LC238 | LCAE1 (−200) | PRJNA248601 | SAMN02799686 | JNNN00000000 | Massilia sp. | 29 | 5,799,774 | 83 | 5,102 | 65 | 7 |
| LC363 | LCEAE (−347) | PRJNA248602 | SAMN02799687 | JNFC00000000 | Sphingopyxis sp. | 28 | 4,210,757 | 73 | 3,908 | 48 | 3 |
a
Sites where samples were obtained in the Lechuguilla Cave, Carlsbad Caverns National Park, New Mexico (refer to Fig. 1, profile map of the Lechuguilla Cave system, in reference 1).