Table IV. Under-represented proteins in laminin α2 chain deficient-diaphragm versus wild-type diaphragm.

Accession	Description	Σ Coverage	p value	Σ Number of peptides	Fold change
P32848	Parvalbumin α	66.36	8.62E-03	11	−4.12
P04247	Myoglobin	57.14	6.47E-03	10	−1.99
Q9WUB3	Glycogen phosphorylase, muscle form	42.87	3.09E-03	35	−1.98
P56392	Cytochrome c oxidase subunit 7A1, mitochondrial	16.25	7.82E-03	1	−1.78
Q5SX40	Myosin-1	61.79	7.96E-03	141	−1.71
O09165	Calsequestrin-1	23.21	8.62E-03	10	−1.71
P16125	l-lactate dehydrogenase B chain	25.15	6.29E-04	10	−1.68
P13707	Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic	25.50	3.10E-03	7	−1.66
Q9D023	Brain protein 44	22.83	6.95E-03	4	−1.64
P13412	Troponin I, fast skeletal muscle	28.57	8.36E-03	6	−1.64
P16015	Carbonic anhydrase 3	46.92	4.44E-03	10	−1.63
P07310	Creatine kinase M-type	61.42	5.35E-03	25	−1.62
Q9CQC7	NADH dehydrogenase [ubiquinone] 1 β subcomplex subunit 4	27.13	1.04E-02	2	−1.61
Q9R0Y5	Adenylate kinase isoenzyme 1	57.73	4.19E-03	12	−1.59
Q9CXZ1	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	8.57	1.86E-02	1	−1.58
Q60932	Voltage-dependent anion-selective channel protein 1	47.97	2.76E-02	11	−1.56
Q8R429	Sarcoplasmic/endoplasmic reticulum calcium ATPase 1	32.39	1.49E-02	34	−1.55
P21550	β-enolase	40.09	1.56E-02	18	−1.54
P45952	Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	19.48	4.87E-04	8	−1.53
Q9DCS9	NADH dehydrogenase [ubiquinone] 1 β subcomplex subunit 10	14.20	1.63E-02	2	−1.53
Q9D6J6	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	12.10	4.23E-03	2	−1.53
Q99JY0	Trifunctional enzyme subunit β, mitochondrial	25.26	6.01E-03	11	−1.53
Q924X2	Carnitine O-palmitoyltransferase 1, muscle isoform	9.59	1.34E-02	6	−1.52
P19783	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	20.71	1.43E-03	5	−1.52
P97457	Myosin regulatory light chain 2, skeletal muscle isoform	71.60	1.63E-02	16	−1.51
Q9Z2I9	Succinyl-CoA ligase [ADP-forming] subunit β, mitochondrial	11.23	1.95E-02	6	−1.50
P41216	Long-chain-fatty-acid–CoA ligase 1	17.31	3.95E-03	11	−1.50
Q6P8J7	Creatine kinase S-type, mitochondrial	33.65	4.52E-03	14	−1.50
P20801	Troponin C, skeletal muscle	47.50	2.44E-02	6	−1.48
Q9DCT2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	20.53	1.07E-02	5	−1.48
P05977	Myosin light chain 1/3, skeletal muscle isoform	76.06	5.77E-03	18	−1.47
Q91VD9	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	16.78	2.11E-02	9	−1.47
Q9WUM5	Succinyl-CoA ligase [GDP-forming] subunit α, mitochondrial	14.74	8.82E-03	5	−1.47
P48962	ADP/ATP translocase 1	41.28	1.39E-02	14	−1.47
P05201	Aspartate aminotransferase, cytoplasmic	32.20	5.97E-03	11	−1.47
P28650	Adenylosuccinate synthetase isozyme 1	17.94	2.70E-02	6	−1.46
P62897	Cytochrome c, somatic	50.48	2.11E-03	6	−1.46
P05064	Fructose-bisphosphate aldolase A	43.96	1.17E-02	18	−1.46
P11404	Fatty acid–binding protein, heart	54.14	1.42E-04	7	−1.46
P54071	Isocitrate dehydrogenase [NADP], mitochondrial	28.32	7.79E-03	11	−1.46
Q8BMS1	Trifunctional enzyme subunit α, mitochondrial	41.28	2.86E-02	23	−1.46
Q9CZU6	Citrate synthase, mitochondrial	34.70	3.01E-02	11	−1.45
P08249	Malate dehydrogenase, mitochondrial	46.45	1.70E-03	13	−1.44
Q9QZ47	Troponin T, fast skeletal muscle	30.15	5.33E-03	9	−1.44
Q3TJD7	PDZ and LIM domain protein 7	4.16	5.81E-03	2	−1.44
P12787	Cytochrome c oxidase subunit 5A, mitochondrial	39.04	2.12E-02	8	−1.42
Q9CQ62	2,4-dienoyl-CoA reductase, mitochondrial	28.06	4.55E-03	7	−1.42
Q60936	Chaperone activity of bc1 complex-like, mitochondrial	9.61	6.42E-03	5	−1.42
P97807	Fumarate hydratase, mitochondrial	25.44	2.82E-03	12	−1.42
Q9DCW4	Electron transfer flavoprotein subunit β	42.35	1.05E-02	11	−1.41
Q9CPQ1	Cytochrome c oxidase subunit 6C	21.05	2.78E-02	2	−1.41
P58774	Tropomyosin β chain	79.23	1.19E-02	34	−1.41
P56391	Cytochrome c oxidase subunit 6B1	20.93	4.53E-03	3	−1.40
Q9DCX2	ATP synthase subunit d, mitochondrial	69.57	1.25E-02	9	−1.39
Q91VR2	ATP synthase subunit γ, mitochondrial	25.17	1.51E-02	9	−1.39
Q99LC3	NADH dehydrogenase [ubiquinone] 1 α subcomplex subunit 10, mitochondrial	14.08	1.38E-02	4	−1.39
P56480	ATP synthase subunit β, mitochondrial	64.46	6.68E-03	22	−1.39
P14152	Malate dehydrogenase, cytoplasmic	25.75	2.26E-04	6	−1.39
Q60597	2-oxoglutarate dehydrogenase, mitochondrial	12.71	2.77E-02	11	−1.38
Q8CAQ8	Mitochondrial inner membrane protein	15.59	1.73E-02	10	−1.37
Q9D3D9	ATP synthase subunit δ, mitochondrial	41.07	4.05E-03	4	−1.37
P47857	6-phosphofructokinase, muscle type	22.69	1.46E-02	14	−1.36
Q9CQQ7	ATP synthase subunit b, mitochondrial	23.05	5.29E-03	5	−1.36
P58771	Tropomyosin α-1 chain	74.30	1.78E-02	31	−1.36
Q99KI0	Aconitate hydratase, mitochondrial	31.79	1.05E-02	21	−1.35
Q9DB20	ATP synthase subunit O, mitochondrial	41.31	1.26E-02	9	−1.35
Q62234	Myomesin-1	16.08	2.91E-02	22	−1.35
Q9CQ69	Cytochrome b-c1 complex subunit 8	34.15	1.23E-02	3	−1.34
Q9CR68	Cytochrome b-c1 complex subunit Rieske, mitochondrial	46.35	2.41E-02	7	−1.34
Q03265	ATP synthase subunit α, mitochondrial	54.97	1.74E-02	27	−1.33
P35486	Pyruvate dehydrogenase E1 component subunit α, somatic form, mitochondrial	19.74	1.04E-02	6	−1.31
Q9CZ13	Cytochrome b-c1 complex subunit 1, mitochondrial	19.17	1.58E-02	9	−1.31
P05202	Aspartate aminotransferase, mitochondrial	26.98	6.45E-03	10	−1.30
Q921G7	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	1.14	1.18E-02	1	−1.29
A2ASS6	Titin	19.75	2.43E-02	550	−1.29
Q8BWT1	3-ketoacyl-CoA thiolase, mitochondrial	25.19	9.29E-03	9	−1.28
P56382	ATP synthase subunit ϵ, mitochondrial	28.85	1.16E-02	2	−1.27