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. 2014 Aug 27;198(3):1001–1014. doi: 10.1534/genetics.114.170019

Table 5. Upregulated Antisense Transcripts (382).

N LOD P P_adj attrib ID attrib name
9 1.570899749 7.66E-10 0 GO:0005353 Fructose transmembrane transporter activity
9 1.570899749 7.66E-10 0 GO:0015578 Mannose transmembrane transporter activity
9 1.508665946 1.69E-09 0 GO:0005355 Glucose transmembrane transporter activity
9 1.454222369 3.47E-09 0 GO:0015145 Monosaccharide transmembrane transporter activity
9 1.454222369 3.47E-09 0 GO:0015149 Hexose transmembrane transporter activity
11 1.340249894 4.22E-10 0 GO:0051119 Sugar transmembrane transporter activity
10 1.298536807 5.17E-09 0 GO:0008645 Hexose transport
10 1.298536807 5.17E-09 0 GO:0015749 Monosaccharide transport
11 1.180032699 7.49E-09 0 GO:0015144 Carbohydrate transmembrane transporter activity
13 1.031860845 9.38E-09 0 GO:0008643 Carbohydrate transport
36 0.41867088 3.33E-06 0.047 GO:0022891 Substrate-specific trans-membrane transporter activity

GO term enrichment reveals an overrepresentation of antisense hexose transporter transcripts in DBP2-deficient cells. Genes with overlapping, antisense transcripts that were significantly overrepresented in dbp2∆ cells as compared to wild type were selected from the RNA sequencing data set. GO term analysis was conducted using FuncAssociate 2.0 as above. The columns are as follows: N, no. of entries in the category; LOD, Log10 of the odds ratio; P, one-sided P-value of the association of attribute and query; P_adj, adjusted P-value as a fraction of 1000 null-hypothesis simulations; attrib ID, GO term 8 identification number for attribution category; attrib name, category name for functional processes.