Table I. Identification of Tic40 loci in three diploid Brassica spp.
Genotype | Taxonomic Group | No. of Polymorphism Fragments | Sequence Identity between Polymorphism Fragmentsa | No. of Tic40 Locib |
---|---|---|---|---|
T14 | B. oleracea group Borecole | 2 | 74% | 2 |
CGN06903 | Wild-type B. oleracea | 3 | 98%, 75%, 75% | 2 |
CGN18458 | B. oleracea group Kohlrabi | 3 | 95%, 73%, 75% | 2 |
T9 | Wild-type B. oleracea | 3 | 96%, 74%, 75% | 2 |
R7 | B. rapa group Broccoletto | 2 | 74% | 2 |
CGN06832 | Wild-type B. rapa group | 2 | 93%, 76%, 77% | 2 |
CGN13925 | B. rapa group Pak Choi | 3 | 96%, 74%, 75% | 2 |
Chiffu | B. rapa group Chinese Cabbage | 2 | 74% | 2 |
CGN06620 | B. nigra var. Abyssinica | 3 | 96%, 70%, 70% | 2 |
CGN06625 | B. nigra var. Abyssinica | 4 | 99%, 99%, 70%, 69%, 70%, 70% | 2 |
CGN06630 | B. nigra var. Abyssinica | 2 | 70% | 2 |
Fragments from within a diploid Brassica spp. with sequence identity over 90% were considered alleles at a Tic40 locus. bDeduced number of loci based on number of polymorphic fragments and sequence identity.