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. 2014 Nov 10;9(11):e109301. doi: 10.1371/journal.pone.0109301

Figure 1. Phylogenetic tree of 38 alpha HPV isolates, constructed to assess the resequencing microarray approach.

Figure 1

The tree was constructed from the 416–base sequences of part of the L1 ORF in the different HPVs. The tree was generated by the neighbor-joining method using BioNumerics v5.10 software (Applied-Maths, Belgium). HPV sequences tiled on RMA (red squares), location of RASs on the tree (blue circles) and cloned HPVs tested with RMAs (green triangles) are indicated.