Table 1. Resequencing microarray assays with cloned HPV DNA.
HPV species | HPV genotype | Call ratea (%) | Accuracyb (%) | BLAST scorec |
α1 | 42 | 96.5 | 99.5 | 780 |
α5 | 51 | 94.4 | 99.3 | 749 |
α6 | 53 | 93.6 | 98.6 | 717 |
56 | 95.7 | 99.5 | 751 | |
66 | 95.4 | 100 | 751 | |
α7 | 18 | 94.5 | 99.5 | 765 |
45 | 94.2 | 99.8 | 764 | |
α9 | 16 | 94.9 | 100 | 767 |
α10 | 6 | 94.7 | 100 | 758 |
11 | 94.4 | 100 | 738 | |
α13 | 54 | 92.1 | 100 | 704 |
γ | 108 | 97.7 | 100 | 809 |
Ratio between the number of bases determined and the sequence length.
Ratio between the number of correctly determined bases and the total number of determined bases.
The score of the highest scoring high-scoring segment pair (HSP) from that database sequence.