Table 7. Repeatability of RMA assay with cloned HPV16 DNA and biological sample with HPV16 monoinfection.
HPV16 | |||||
Cloned HPV DNA | Sample n°312 | ||||
HPV sequence tiled on RMA | Call ratea | Standard deviationb | Call ratea | Standard deviationb | |
Homonymous | HPV16 | 89.6 | 2.2 | 91.4 | 1.6 |
Non-homonymous | HPV30 | 29.2 | 0.45 | 26.1 | 0.9 |
HPV33 | 28.0 | 1.4 | 18.7 | 1.6 | |
Reconstructed Ancestral Sequence | RAS814 | 53 | 2.8 | 35.2 | 1.9 |
Ratio between the number of bases determined and the sequence length.
Microarray assays were done in triplicate.