Skip to main content
. 2014 Aug 27;5(18):8790–8802. doi: 10.18632/oncotarget.2405

Table 2. Statistics for each population separately for the single most abundant isomiR produced from a given precursor arm.

The most abundant isomiR's identity was determined by analyzing the collection of all unique datasets that passed quality control and belonged to the population under consideration (a total of 452 datasets; no technical replicates were included). At each locus, we also generated the “conservative” estimate (4th row) by requiring that the most abundant isomiR have higher expression than the miRBase reference by at least 0.585 log2 units.

CEU FIN GBR TSI YRI
Number Percentage Number Percentage Number Percentage Number Percentage Number Percentage
MiRNA precursor arms considered 196 185 188 185 197
MiRBase miRNA sequence not among the 95-th percentile 61 31% 54 29% 57 30% 55 30% 59 30%
Top isomiR not in agreement with miRBase 95 48% 87 47% 92 49% 90 49% 93 47%
Top isomiR (conservative) not in agreement with miRBase 85 43% 79 43% 84 45% 81 44% 83 42%
Top isomiR disagrees with miRBase at 5' end 13 7% 11 6% 10 5% 10 5% 11 6%
Top isomiR disagrees with miRBase at 5' end only 2 1% 3 2% 3 2% 2 1% 2 1%
Top isomiR disagrees with miRBase at 3' end 93 47% 84 45% 89 47% 88 48% 91 46%
Top isomiR disagrees with miRBase at 3' end only 82 42% 76 41% 82 44% 80 43% 82 42%
Top isomiR disagrees with miRBase at both ends 11 6% 8 4% 7 4% 8 4% 9 5%