Table 2.
Treatment | Time point (hr) | Replicate (#) | Lane on HiSeq 2000 | Total reads | Uniquely mapped reads | Uniquely mapped reads (%) |
---|---|---|---|---|---|---|
Control | 0 | 1 | 4 | 10,150,369 | 8,047,650 | 79.3% |
Control | 0 | 2 | 4 | 11,849,953 | 9,207,421 | 77.7% |
Control | 0 | 3 | 3 | 11,272,789 | 9,164,808 | 81.3% |
Dehydration | 1 | 1 | 3 | 6,875,669 | 5,571,406 | 81.0% |
Dehydration | 1 | 2 | 3 | 6,744,882 | 4,948,665 | 73.4% |
Dehydration | 1 | 3 | 3 | 8,650,675 | 6,612,402 | 76.4% |
Dehydration | 6 | 1 | 3 | 11,828,271 | 9,624,573 | 81.4% |
Dehydration | 6 | 2 | 3 | 11,355,361 | 8,599,941 | 75.7% |
Dehydration | 6 | 3 | 4 | 10,038,099 | 8,009,975 | 79.8% |
Dehydration | 12 | 1 | 4 | 9,270,260 | 7,194,931 | 77.6% |
Dehydration | 12 | 2 | 4 | 5,555,797 | 4,050,429 | 72.9% |
Dehydration | 12 | 3 | 4 | 5,105,827 | 4,087,108 | 80.0% |
Salt | 1 | 1 | 2 | 38,214,261 | 30,683,738 | 80.3% |
Salt | 1 | 2 | 2 | 9,046,880 | 7,428,387 | 82.1% |
Salt | 1 | 3 | 2 | 9,423,474 | 7,202,416 | 76.4% |
Salt | 6 | 1 | 2 | 7,445,356 | 5,580,211 | 74.9% |
Salt | 6 | 2 | 2 | 5,890,968 | 4,422,058 | 75.1% |
Salt | 6 | 3 | 2 | 25,296,306 | 14,687,424 | 58.1% |
Salt | 12 | 1 | 2 | 7,481,184 | 5,253,438 | 70.2% |
Salt | 12 | 2 | 3 | 14,201,579 | 11,170,436 | 78.7% |
Salt | 12 | 3 | 4 | 13,124,265 | 9,645,045 | 73.5% |
Total | 238,822,225 | 181,192,462 | 75.9% | |||
Average | 11,372,487 | 8,628,212 | 76.5% |