Table 1. Analysis of five rare CARD14 variants using Fisher's exact test.
p.Met119Val |
p.Arg166His |
p.Ala216Thr |
p.Thr591Met |
p.Arg682Trp |
Combination of five variants |
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AA | Aa | aa | Allele frequency (a) | AA | Aa | aa | Allele frequency (a) | AA | Aa | aa | Allele frequency (a) | AA | Aa | aa | Allele frequency (a) | AA | Aa | aa | Allele frequency (a) | AA | Aa | aa | Allele frequency (a) | |
P-PsV | 94 | 0 | 0 | 94 | 0 | 0 | 93 | 1 | 0 | 0.005 | 94 | 0 | 0 | 94 | 0 | 0 | 93 | 1 | 0 | 0.005 | ||||
L-PsV | 80 | 0 | 0 | 80 | 0 | 0 | 80 | 0 | 0 | 79 | 1 | 0 | 0.006 | 80 | 0 | 0 | 79 | 1 | 0 | 0.006 | ||||
PsV | 174 | 0 | 0 | 174 | 0 | 0 | 173 | 1 | 0 | 0.003 | 173 | 1 | 0 | 0.003 | 174 | 0 | 0 | 172 | 2 | 0 | 0.006 | |||
GPP | 61 | 1 | 0 | 0.008 | 61 | 1 | 0 | 0.008 | 62 | 0 | 0 | 62 | 0 | 0 | 61 | 1 | 0 | 0.008 | 59 | 3 | 0 | 0.024 | ||
Psoriasis | 235 | 1 | 0 | 0.002 | 235 | 1 | 0 | 0.002 | 235 | 1 | 0 | 0.002 | 235 | 1 | 0 | 0.002 | 235 | 1 | 0 | 0.002 | 231 | 5 | 0 | 0.011 |
Control | 365 | 0 | 0 | 365 | 0 | 0 | 365 | 0 | 0 | 365 | 0 | 0 | 365 | 0 | 0 | 365 | 0 | 0 | ||||||
P (Psoriasis versus control) | 0.393 (0.561) | 0.393 (0.561) | 0.393 (0.561) | 0.393 (0.561) | 0.393 (0.561) | 0.009 (0.09) | ||||||||||||||||||
P (PsV versus GPP) | 0.263 (0.438) | 0.263 (0.438) | 1 (1) | 1 (1) | 0.263 (0.438) | 0.115 (0.438) | ||||||||||||||||||
P (PsV versus control) | 1 (1) | 1 (1) | 0.322 (0.998) | 0.322 (0.998) | 1 (1) | 0.104 (0.998) | ||||||||||||||||||
P (GPP versus control) | 0.145 (0.29) | 0.145 (0.29) | 1 (1) | 1 (1) | 0.145 (0.29) | 0.003 (0.03) | ||||||||||||||||||
P (P-PsV versus L-PsV) | 1 (1) | 1 (1) | 1 (1) | 0.46 (1) | 1 (1) | 1 (1) |
Abbreviations: GPP, generalized pustular psoriasis; L-PsV, late-onset psoriasis vulgaris; P-PsV, pediatric-onset psoriasis vulgaris; PsV, psoriasis vulgaris (including P-PsV and L-PsV); Ps, psoriasis (including PsV and GPP).
In the table, there are two types of P-values—nominal and corrected, of which the latter are in parentheses, calculated by false-discovery rate.