Table 1. Effect of Mutations of Phosphodianion Gripper Amino Acid Residues on the Kinetic Parameters for OMPDC-Catalyzed Decarboxylation of OMPa.
OMPDC | I | kcat (s–1)b | Km (M)b | kcat/Km (M–1 s–1) |
---|---|---|---|---|
wild type | 0.105 | 15 | 1.4 × 10–6 | 1.1 × 107 |
Q215Ac | 0.105 | 24 ± 1 | (0.94 ± 0.09) × 10–4 | 2.6 × 105 |
Y217F | 0.105 | 20 ± 1 | (1.1 ± 0.15) × 10–4 | 1.8 × 105 |
R235Ad | 0.105 | 1.0 | (1.1 ± 0.15) × 10–3 | 910 |
Q215A/Y217Fe | 0.105 | 4.8 ± 0.25 | (1.4 ± 0.24) × 10–3 | 3.4 × 103 |
0.05 | 5.0 ± 0.32 | (0.29 ± 0.04) × 10–3 | 1.7 × 104 | |
Q215A/R235Af | 0.105 | 0.020 ± 0.02 | (1.4 ± 0.1) × 10–3 | 14 |
0.05 | 0.019 ± 0.05 | (3.5 ± 0.3) × 10–4 | 54 | |
Y217F/R235Ag | 0.105 | 0.11 ± 0.016 | (27.1 ± 4.4) × 10–3 | 4.1 |
0.075 | 0.11 ± 0.016 | (12.9 ± 2.1) × 10–3 | 8.5 | |
0.05 | 0.11 ± 0.016 | (6.1 ± 1.1) × 10–3 | 18 | |
triple mutanth | 0.105 | (4.8 ± 0.8) × 10–4 | (12.9 ± 2.4) × 10–3 | 0.037 |
0.05 | (4.8 ± 0.8) × 10–4 | (2.2 ± 0.5) × 10–3 | 0.22 |
For reactions at pH 7.1 (30 mM MOPS), 25 °C, and constant ionic strength (NaCl).
The quoted errors are the standard deviations obtained from the nonlinear least-squares fits of data from Figures 3 and 4 to the Michaelis–Menten equation.
Data from ref (33).
Data from ref (34).
Data from Figure 3A.
Data from Figure 3B.
Data from Figure 4A.
Data from Figure 4B.