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. 2014 Nov 12;9(11):e107728. doi: 10.1371/journal.pone.0107728

Table 3. Xenobiotic response elements upstream of C. teleta CYPs.

CYP Number of XREs 10 kb upstream
CYP331A1* 3
CYP331A2 0
CYP331A3 0
CYP331B1 1
CYP4V25 2
CYP4AT1* 1
CYP4BK4 4
CYP4EE1 0
CYP3060A1 1
CYP3061A1 1

Each gene was searched for the consensus xenobiotic response element (XRE) sequence TNGCGTG [39], 10 kb upstream of the start site. Genes were chosen based on homology to vertebrate CYP1s and genes from clan 3 and 4. Genes were searched in the 10 kb upstream region. The asterisks mark the genes which were transcriptionally upregulated with exposure to the PAHs benzo[α]pyrene, 3-methylcholanthrene, or fluoranthene [18]. p-value of 5.96e−05 and q-value of 1 for all sites.