Table 3. Xenobiotic response elements upstream of C. teleta CYPs.
CYP | Number of XREs 10 kb upstream |
CYP331A1* | 3 |
CYP331A2 | 0 |
CYP331A3 | 0 |
CYP331B1 | 1 |
CYP4V25 | 2 |
CYP4AT1* | 1 |
CYP4BK4 | 4 |
CYP4EE1 | 0 |
CYP3060A1 | 1 |
CYP3061A1 | 1 |
Each gene was searched for the consensus xenobiotic response element (XRE) sequence TNGCGTG [39], 10 kb upstream of the start site. Genes were chosen based on homology to vertebrate CYP1s and genes from clan 3 and 4. Genes were searched in the 10 kb upstream region. The asterisks mark the genes which were transcriptionally upregulated with exposure to the PAHs benzo[α]pyrene, 3-methylcholanthrene, or fluoranthene [18]. p-value of 5.96e−05 and q-value of 1 for all sites.