Table 2.

The predictive accuracy (AUC) of gene ordering by a Bayesian learning method [APN; Battle et al. (2010)], Réd, our proposed approach, and its simplified variants: without factorization (RAW) and with factorization but in the absence of transformation by logistic function (MF)

Prediction	AUC
	RAW	MF	APN	Réd
KEGG pathway ordering	0.563	0.583	0.648	0.728
N-linked glycosylation pathway	0.591	0.638	0.731	0.749