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. 2014 Nov 13;10(11):e1004787. doi: 10.1371/journal.pgen.1004787

Figure 4. The comparison between GPA and GSEA at number of risk SNPs Inline graphic = 1000.

Figure 4

Here we fixed Inline graphic and varied Inline graphic to evaluate the power for sample size Inline graphic = 2000 (Upper Left panel), 5000 (Upper Right panel), 10000 (Lower Left panel), respectively. We used Inline graphic to evaluate the type I errors (Lower Right panel). The results are based on 500 simulations.