Table 3. GPA results for all pairs of the five psychiatric disorders with the CNS set as annotation.

					p-value
ADHD-ASD	0.212 (0.002)	0.425 (0.146)	0.272 (0.013)	0.022 (1.879)	4.205e-06
ADHD-BPD	0.202 (0.003)	0.975 (0.261)	0.304 (0.010)	0.216 (0.143)	2.965e-47
ADHD-MDD	0.209 (0.004)	0.490 (0.411)	0.251 (0.014)	0.001 (2.357)	0.005
ADHD-SCZ	0.204 (0.002)	0.001 (2.349)	0.261 (0.015)	0.511 (0.100)	7.132e-79
ASD-BPD	0.204 (0.003)	0.164 (0.073)	0.285 (0.015)	0.318 (0.022)	2.058e-51
ASD-MDD	0.193 (0.006)	0.470 (0.069)	0.309 (0.018)	0.002 (0.171)	3.251e-09
ASD-SCZ	0.199 (0.002)	0.295 (0.028)	0.296 (0.008)	0.255 (0.018)	2.078e-81
BPD-MDD	0.195 (0.004)	0.568 (0.025)	0.367 (0.066)	0.222 (0.023)	7.314e-48
BPD-SCZ	0.206 (0.001)	0.001 (6.907)	0.026 (0.720)	0.309 (0.006)	2.860e-130
MDD-SCZ	0.204 (0.002)	0.001 (16.882)	0.732 (1.019)	0.260 (0.011)	7.324e-78

The estimated almost remain the same as Table 2 and are shown in the table. The values in the brackets are standard errors of the estimates. The p-values of hypothesis testing (14) are provided in the last column.