Table 3. Similarity scores for tRNA synthetase genes.
KEGG orthology | Gene name | NS | A | B | C |
K01872 | Alanyl-tRNA synthetase | 24 | 85.11 | 80.07 | 84.71 |
K01887 | Arginyl-tRNA synthetase | 23 | 76.14 | 93.67 | 79.31 |
K01893 | Asparaginyl-tRNA synthetase | 32 | 89.44 | 91.00 | 85.96 |
K01876 | Aspartyl-tRNA synthetase | 29 | 87.88 | 91.10 | 86.28 |
K01883 | Cysteinyl-tRNA synthetase | 25 | 75.75 | 81.38 | 84.75 |
K01886 | Glutaminyl-tRNA synthetase | 16 | 76.87 | 80.29 | 85.32 |
K01885 | Glutamyl-tRNA synthetase | 22 | 93.44 | 89.99 | 90.27 |
K01880 | Glycyl-tRNA synthetase | 18 | 80.30 | 82.07 | 68.41 |
K01892 | Histidyl-tRNA synthetase | 23 | 82.39 | 80.93 | 93.00 |
K01870 | Isoleucyl-tRNA synthetase | 29 | 73.20 | 84.47 | 85.99 |
K01869 | Leucyl-tRNA synthetase | 28 | 84.43 | 80.77 | 78.68 |
K04567 | Lysyl-tRNA synthetase, class II | 24 | 72.61 | 83.08 | 75.03 |
K01874 | Methionyl-tRNA synthetase | 30 | 87.02 | 90.63 | 93.46 |
K01889 | Phenylalanyl-tRNA synthetase | 30 | 82.94 | 77.28 | 91.94 |
K01890 | Phenylalanyl-tRNA synthetase | 16 | 93.35 | 77.13 | 77.84 |
K01881 | Prolyl-tRNA synthetase | 23 | 84.01 | 87.98 | 79.11 |
K01875 | Seryl-tRNA synthetase | 30 | 74.98 | 73.18 | 90.28 |
K01868 | Threonyl-tRNA synthetase | 35 | 89.14 | 73.77 | 78.12 |
K01867 | Tryptophanyl-tRNA synthetase | 28 | 82.83 | 84.23 | 81.47 |
K01866 | Tyrosyl-tRNA synthetase | 30 | 79.04 | 73.57 | 87.78 |
K01873 | Valyl-tRNA synthetase | 25 | 78.60 | 86.56 | 78.30 |
Mean | 82.36 | 83.01 | 83.62 | ||
Std | 6.10 | 6.01 | 6.36 |
Cluster overlapping scores for the comparison of the phylogenetic trees generated with (A) GAFD and NW, (B) GAFD and Phylip, and (C) NW and Phylip.
NS = Number of sequences.