Table 4. Similarity scores for ribosomal protein genes and rRNAs.

KEGG orthology	Gene name	NS	A	B	C
K01982	Large subunit ribosomal RNA	65	75.33	93.57	81.04
K01979	Small subunit ribosomal RNA	64	76.99	87.50	81.13
K02963	Ribosomal protein S18	22	81.19	79.31	84.85
K02964	Ribosomal protein S18e	27	89.18	90.45	96.32
	Mean		80.67	87.71	85.84
	Std		5.36	5.31	6.25

Cluster overlapping scores for the comparison of the phylogenetic trees generated with (A) GAFD and NW, (B) GAFD and Phylip, and (C) NW and Phylip.

NS = Number of sequences.