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. 2014 Nov 15;5(4):427–437. doi: 10.4291/wjgp.v5.i4.427

Table 2.

Summary1 of the polymorphisms in genes related to pancreatitis

Name of the gene Chromosome No. of splice variants Length (bp) of exon region No. of exons
CTRC 1 4 898 8
CASR 3 4 5009 7
PRSS1 7 6 800 5
CTSB 8 35 3875 10
SPINK1 5 3 542 4
CFTR 7 11 6128 27
CLDN2 X 3 3150 2

1Extracted from ENSEMBL. Upstream Gene variants: A sequence variant located 5’ of a gene. Downstream gene variants: A sequence variant located 3’ of a gene. Non-coding exon variants: A sequence variant that changes non-coding exon sequence. Synonymous variants: There is no change in the resulting aminoacid. Missense variants: Variant that changes one or more bases, resulting in a different aminoacid but where the length is preserved. Stop gained: Sequence variant whereby at least one base of a codon is changed, resulting in premature stop codon, leading to a shortened transcript. Intron variants: a variant occurring within an intron. CTRC: Chymotrypsin C; CASR: Calcium sensing Receptor; PRSS1: Trypsinogen Gene; CTSB: Cathepsin B; SPINK1: Serine protease inhibitor kazal type 1; CFTR: Cystic fibrosis transmembrane conductance regulator; CLDN2: Claudin 2.