Table 1.
CR Genes Identified in Holocentric and Nonholocentric Insecta
Class | Order | Species | Protein Identifiera | Protein Sequence Identityb (%) | Protein Length | Conserved Protein Domains |
|
---|---|---|---|---|---|---|---|
HTH_CENP-B_N | HTH_Tnp_Tc5 | ||||||
Insecta | Diptera | Drosophila melanogaster | CAG (CG12346) | 100 | 225 | X | X |
D. simulans | GD15259 | 97.22 | 111 | X | — | ||
D. sechelia | GM20484 | 94.67 | 225 | X | X | ||
D. yakuba | GE13064 | 92.44 | 225 | X | X | ||
D. erecta | GG22708 | 93.24 | 207 | X | X | ||
D. ananassae | GF13390 | 59.11 | 222 | X | X | ||
D. pseudoobscura | GA11571 | 57.46 | 228 | X | X | ||
D. persimilis | GL17090 | 58.77 | 228 | X | X | ||
D. willistoni | GK19073 | 40.29 | 222 | X | X | ||
D. virilis | GJ16124 | 39.81 | 227 | X | X | ||
Insecta | Lepidoptera | Bombyx mori | BGIBMGA013031 | 32.09 | 278 | X | X |
BGIBMGA008012 | 26.35 | 501 | X | X | |||
BGIBMGA007903 | 25 | 468 | X | X | |||
BGIBMGA013624 | 29.63 | 722 | X | X | |||
Insecta | Lepidoptera | Heliconius melpomene | HMEL009793 | 35.38 | 255 | X | X |
HMEL010729 | 33.8 | 295 | X | X | |||
HMEL014790 | 31.55 | 533 | X | X | |||
HMEL007960 | 50 | 533 | X | X | |||
HMEL011593 | 35.38 | 192 | X | X | |||
Insecta | Lepidoptera | Helicoverpa armigera | 94B11_25* | 22.22# | 488 | X | X |
Insecta | Lepidoptera | Spodoptera frugiperda | 72F01* | 23.61# | 488 | X | X |
Insecta | Coleoptera | Tribolium castaneum | TC003750 | 26.39 | 1175 | X | X |
TC001653 | 30 | 486 | X | — | |||
TC005011 | 51.49 | 212 | — | X |
aAll sequences can be downloaded from Ensembl Metazoa except those with an “*” that can be downloaded from LepidoDB.
bProtein sequence identity estimated using BLASTp except for those with an “#” estimated using ClustalW (see Materials and Methods).