Table 2.
2a. pre-mRNA/mRNAs individually associated with supraspliceosomes | ||
---|---|---|
Pre-mRNA/mRNA | Cells origin | References |
Poly(A) + nuclear RNA | Syrian hamster | [21] |
CADa | Syrian hamster | [97] |
DHFRa | Syrian hamster | [21] |
ß-Actina | Syrian hamster; HeLa | [94] |
Histone H4a | Syrian hamster; HeLa | [21] |
AdML minigenea | HeLa | [18] |
SMNa | HeLa; HEK 293 | [33] |
ADAR 2a | HeLa; HEK 293 | [33] |
hnRNP A/Ba | HeLa; HEK 293 | [33] |
Tau minigenea | HEK 293 | [14] |
HTR2C minigenea | HEK 293 | [57] |
2b. U snRNAs associated with supraspliceosomes | ||
U snRNA | Cell origin | References |
U1 | HeLa; Syrian hamster; TD40 | [10–12,17–19,98] |
U2 | HEK 293; HeLa; Syrian hamster; TD40 | [10–12,17–19,87,98] |
U4 | HEK 293; HeLa Syrian hamster; TD40 |
[10–12,17–19,87] |
U5 | HeLa; Syrian hamster; TD40 | [10–12,17–19] |
U6 | HeLa; Syrian hamster; TD40 | [10–12,17–19,98] |
2c. Small non-coding RNAs associated with supraspliceosomesb | ||
Small non-coding RNA | Cell origin | References |
Initiator-tRNA | HEK 293 | [87] |
Intronic pre-miRNAsc: | ||
miR-762 (HTR2C)d | HeLa | [69] |
miR-1912 (HTR2C)d | HeLa | [69] |
miR-1264 (HTR2C)d | HeLa | [69] |
miR-1298 (HTR2C)d | HeLa | [69] |
miR-106b (MCM7)d | HeLa | [64] |
miR-93 (MCM7)d | HeLa | [64] |
miR-25 (MCM7)d | HeLa | [64] |
miR-330 (EML2)d | HeLa | [64] |
Examples of pre-mRNA/mRNAs each individually associated with a supraspliceosome.
A temporary list of small non-coding RNAs associated with supraspliceosomes.
A list of published intronic pre-miRNAs found associated with supraspliceosomes.
Host gene of intronic miRNA.