Table 2.
Sequence analysis of the −35 region of the orf2 / folC promoter among various S. suis isolates and serotypes 1
Phenotype | −35 promoter sequence (5′- 3′) | ||||||
---|---|---|---|---|---|---|---|
Serotype | MRP 2 | EF 3 | CGH cluster 4 | Clonal complex | TGGACA | TGGTCA | TTGTCA |
1 | - | - | B | 13 | 1/1 | ||
1 | S | + | A | 1 | 4/4 | ||
2 | - | - | B | 16/29/147 | 6/6 | ||
2 | + | - | B | 28 | 1/1 | ||
2 | + | * | A | 1 | 7/7 | ||
2 | - | * | A | 1 | 1/1 | ||
2 | + | + | A | 1 | 9/9 | ||
7 | - | - | B | 29/1 | 1/85 | 6/8 | 1/8 |
9 | - | - | B | 16 | 2/2 | ||
9 | * | - | B | 16 | 6/6 | ||
9 | + | - | B | 16 | 1/1 |
1 S. suis isolates were described in de Greeff et al. [14].
2*indicates an higher molecular weight form of MRP; s indicates a lower molecular weight form of MRP.
3*indicates an higher molecular weight form of EF.
4All isolates were genotyped using Comparative Genome Hybridization (CGH) [14].
5This isolate belongs to clonal complex 1.
“-” indicates absence of the protein; “+” indicates presence of the protein.