Table 4.
Statistics of QTL that interact with sex
| |
|
|
Position |
Flanking markers
c
|
am + dm + im
d
|
am + dm
e
|
am
f
|
||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chr | Trait a | Groups | (cM) b | Left | Right | P -value | %var | P -value | % var | P -value | % var |
| 1 |
Soleus |
pQTL |
19 |
rs3696088 |
rs13472794 |
1.57E-06 |
2.94 |
3.28E-01 |
0.23 |
5.05E-01 |
0.05 |
| 1 |
Pec |
pQTL |
23 |
rs3696088 |
rs13472794 |
1.23E-03 |
1.45 |
5.64E-03 |
0.95 |
7.01E-04 |
1.07 |
| 1 |
Edl |
pQTL |
89 |
rs3666905 |
rs13476312 |
1.65E-02 |
1.03 |
3.48E-01 |
0.21 |
1.68E-01 |
0.19 |
| 2 |
P |
tQTL |
34 |
rs6268714 |
rs13476554 |
1.18E-02 |
1.53 |
3.73E-03 |
1.55 |
2.04E-01 |
0.23 |
| 3 |
Pec |
pQTL |
36 |
rs13477132 |
rs13477174 |
1.90E-02 |
0.99 |
8.37E-02 |
0.50 |
2.39E-02 |
0.51 |
| 3 |
Edl |
pQTL |
64 |
rs3663873 |
rs13477430 |
4.79E-02 |
0.80 |
2.09E-02 |
0.78 |
4.70E-01 |
0.05 |
| 6 |
EGF |
eQTL |
32 |
rs13478839 |
rs4226048 |
4.18E-03 |
1.79 |
2.08E-03 |
1.67 |
4.85E-04 |
1.64 |
| 6 |
Fat |
pQTL |
10 |
petM-02094-1 |
rs3678887 |
3.61E-02 |
0.86 |
2.06E-02 |
0.78 |
3.46E-01 |
0.09 |
| 6 |
AI |
pQTL |
11 |
petM-02094-1 |
rs3678887 |
6.05E-02 |
0.73 |
3.85E-02 |
0.65 |
5.31E-01 |
0.04 |
| 7 |
Pec |
pQTL |
47 |
rs3676254 |
rs3656205 |
5.61E-03 |
1.25 |
2.84E-03 |
1.16 |
3.39E-03 |
0.85 |
| 9 |
Fat |
pQTL |
15 |
rs3719607 |
rs8259427 |
2.31E-02 |
0.95 |
1.02E-02 |
0.92 |
4.53E-01 |
0.06 |
| 9 |
AI |
pQTL |
15 |
rs3719607 |
rs8259427 |
3.50E-02 |
0.85 |
1.61E-02 |
0.82 |
5.38E-01 |
0.04 |
| 11 |
AI |
pQTL |
14 |
rs6276300 |
rs6199956 |
3.29E-02 |
0.87 |
4.53E-02 |
0.62 |
4.35E-02 |
0.41 |
| 11 |
Fat |
pQTL |
15 |
rs6276300 |
rs6199956 |
3.75E-02 |
0.85 |
4.80E-02 |
0.61 |
3.65E-02 |
0.44 |
| 11 |
Gastro |
pQTL |
24 |
rs6276300 |
rs6199956 |
3.00E-04 |
1.90 |
1.77E-04 |
1.74 |
3.23E-05 |
1.74 |
| 11 |
BMI |
pQTL |
49 |
rs13481054 |
rs3701609 |
1.44E-01 |
0.54 |
6.64E-02 |
0.54 |
2.85E-02 |
0.48 |
| 14 |
BMI |
pQTL |
65 |
rs3709178 |
rs13482404 |
1.54E-02 |
1.03 |
1.16E-01 |
0.43 |
5.64E-01 |
0.03 |
| 17 |
Gastro |
pQTL |
11 |
rs13482893 |
rs3719497 |
1.15E-01 |
0.59 |
5.29E-02 |
0.59 |
1.67E-02 |
0.57 |
| 17 |
AI |
pQTL |
13 |
rs13482893 |
rs3719497 |
5.86E-02 |
0.73 |
2.56E-02 |
0.72 |
4.15E-02 |
0.41 |
| 17 | Fat | pQTL | 13 | rs13482893 | rs3719498 | 4.83E-02 | 0.78 | 2.11E-02 | 0.77 | 4.19E-02 | 0.41 |
aTrait abbreviations are the same as in Table 1. P: total protein.
bPeak position of QTL detected in Kosambi centimorgans.
cFlanking markers (left and right) of the QTL peak. See Additional file 1: Table S6 for marker information.
dam + dm + im tested the overall interaction, which included additive, dominance, and imprinted pQTL by sex interactions. P-value < 0.05 is shown in italics %var: percentage of phenotypic variance accounted for at QTL position.
eam + dm tested for non-imprinted interactions, which included additive and dominance pQTL by sex interactions. P-value < 0.05 is shown in italics %var: percentage of phenotypic variance accounted for at QTL position.
fam tested the additive interaction, which included additive pQTL by sex interactions. P-value < 0.05 is shown in italics %var: percentage of phenotypic variance accounted for at QTL position.