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. 2014 Oct 1;178(2):262–269. doi: 10.1111/cei.12420

Table 3.

The primers, polymerase chain reaction (PCR) conditions and restricion enzymes used in this study

Primer pairs PCR conditions Restriction enzymes
VDR rs7975232 (ApaI) 5′-CAGAGCATGGACAGGGAGCAA-3′ 5′-GCAACTCCTCATGGCTGAGGTCTC-3′ 95°C for 5 min (95°C for 30 s, 70°C for 30 s, 72°C for 60 s) × 35cycles 72°C for 5 min ApaI
rs1544410 (BsmI) 5′-CAACCAAGACTACAAGTACCGCGTCAGTGA-3′ 5′-AACCAGCGGGAAGAGGTCAAGGG-3′ 95°C for 3 min (95°C for 30 s, 60°C for 30 s, 72°C for 30 s) × 35cycles 72°C for 5 min BsmI
rs2228570 (FokI) 5′-AGCTGGCCCTGGCACTGACTCTGCTCT-3′ 5′-ATGGAAACACCTTGCTTCTTCTCCCTC-3′ 95°C for 5 min (95°C for 30 s, 61°C for 30 s, 72°C for 30 s) × 35cycles 72°C for 5 min FokI
rs731236 (TaqI) 5′-CAGAGCATGGACAGGGAGCAA-3′ 5′-GCAACTCCTCATGGCTGAGGTCTC-3′ 95°C for 5 min (95°C for 30 s, 70°C for 30 s, 72°C for 60 s) × 35cycles 72°C for 5 min TaqI
GC rs7041 5′-AAATAATGAGCAAATGAAAGAAGAC-3′ 5′-CAATAACAGCAAAGAAATGAGTAGA-3′ 95°C for 3 min (95°C for 30 s, 64°C for 30 s, 72°C for 30 s) × 30cycles 72°C for 7 min HaeIII
rs4588 5′-AAATAATGAGCAAATGAAAGAAGAC-3′ 5′-CAATAACAGCAAAGAAATGAGTAGA-3′ 95°C for 3 min (95°C for 30 s, 64°C for 30 s, 72°C for 30 s) × 30cycles 72°C for 7 min StyI
CYP2R1 rs10741657 5′-GGGAAGAGCAATGACATGGA-3′ 5′-GCCCTGGAAGACTCATTTTG-3′ 95°C for 5 min (95°C for 30 s, 55°C for 30 s, 72°C for 30 s) × 35cycles 72°C for 5 min MnlI