Table 2.

miRNA repertoire targeting conserved and lineage-specific R-genes in plants

Lineage-specific WGD rounds	Conserved 1				Non-conserved 2
	Species	Targets 3	Total orth 4	(%) 5	Targets 3	Total non-orth 4	(%) 5
Monocot
0 WGD	OS	178	521	34.17	771	2116	36.44
0 WGD	BD	156	495	31.52	319	1167	27.34
0 WGD	SB	158	413	38.26	489	1304	37.50
1 WGD	ZM	105	319	32.92	448	1548	28.94
Eudicot
0 WGD	VV	29	282	10.28	124	796	15.58
0 WGD	TC	77	149	51.68	554	1290	42.95
0 WGD	CP	22	101	21.78	116	602	19.27
0 WGD	FV	39	108	36.11	275	1344	20.46
1 WGD	MD	49	125	39.20	1516	4127	36.73
1 WGD	PT	59	122	48.36	389	1175	33.11
1 WGD	LJ	23	46	50.00	219	622	35.21
2 WGD	AT	51	74	68.92	685	1485	46.13
2 WGD	GM	72	148	48.65	1307	3162	41.33

Note: OS, BD, SB, ZM, VV, TC, CP, FV, MD, PT, LJ, AT, and GM represent Rice, Brachypodium, Sorghum, Maize, Grape, Cacao, Papaya, Strawberry, Poplar, Lotus, Arabidopsis, and Soybean, respectively; ¹Conserved R-genes are associated with orthologous genes with other monocots and eudicots species; ²Non-conserved R-genes do not have orthologous genes with other species either monocots and eudicots; ³Number of R-genes targeted by miRNAs; ⁴Number of total orthologous genes; ⁵Percentage of R-genes targeted by miRNAs.