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. 2014 Apr 23;15:304. doi: 10.1186/1471-2164-15-304

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Copyright © 2014 Corrado et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Analyzing combinatorial features, step 2: RBP site classification. The pairwise classification performance values are displayed for cluster S2 (A) and cluster S4 (B). AUROCC values are shown in the top-right halves of the tables and colored in shades of green, while F1-scores are shown in the bottom-left halves of the tables and colored in shades of blue. The distributions of the distances between binding sites of two distinct trans-factors belonging to cluster S2 (C) and S4 (D) are also shown.