Table 2.
Class | Cluster | Trans-factors |
---|---|---|
Singleton |
Clust S01 |
HNRNPD |
RBP |
Clust S02 |
CAPRIN1, FUS, FXR1, MOV10, TAF15 |
Singleton |
Clust S03 |
HNRNPH |
RBP |
Clust S04 |
C22ORF28, CAPRIN1, MOV10 |
Singleton |
Clust S05 |
HNRNPC |
Singleton |
Clust S06 |
HNRNPU |
Singleton |
Clust S07 |
HNRNPF |
Singleton |
Clust S08 |
PUM1 |
miRNA |
Clust S09 |
hsa-miR-15a, hsa-miR-15b, hsa-miR-16, |
|
|
hsa-miR-424 |
RBP-miRNA |
Clust S10 |
PUM2, hsa-miR-130a, hsa-miR-130b, |
|
|
hsa-miR-148a, hsa-miR-148b, hsa-miR-19a, |
|
|
hsa-miR-19b, hsa-miR-301a, hsa-miR-301b |
Singleton |
Clust S11 |
HNRNPA2B1 |
Singleton |
Clust S12 |
PABPC1 |
Singleton |
Clust S13 |
U2AF2 |
miRNA |
Clust S14 |
hsa-miR-106b, hsa-miR-17, hsa-miR-20a, |
|
|
hsa-miR-93 |
RBP |
Clust S15 |
MOV10, PUM2 |
miRNA |
Clust S16 |
hsa-let-7a, hsa-let-7b, hsa-let-7c, hsa-let-7d, |
|
|
hsa-let-7e, hsa-let-7f, hsa-let-7g, hsa-let-7i |
Singleton |
Clust S17 |
DGCR8 |
Singleton |
Clust S18 |
C17ORF85 |
Singleton |
Clust S19 |
TARDBP |
RBP |
Clust S20 |
FUS, MOV10, TAF15 |
RBP-miRNA |
Clust S21 |
PUM2, hsa-miR-103, hsa-miR-107, |
|
|
hsa-miR-183, hsa-miR-221, hsa-miR-222, |
|
|
hsa-miR-23b, hsa-miR-25, hsa-miR-27a, |
|
|
hsa-miR-27b, hsa-miR-32, hsa-miR-92a, |
|
|
hsa-miR-96 |
miRNA |
Clust S22 |
hsa-miR-103, hsa-miR-107, hsa-miR-15a, |
|
|
hsa-miR-15b, hsa-miR-16, hsa-miR-29a, |
|
|
hsa-miR-29b, hsa-miR-29c, hsa-miR-424 |
Singleton |
Clust S23 |
CELF1 |
Singleton |
Clust S24 |
hsa-miR-124 |
Singleton | Clust S25 | hsa-miR-1 |
Clusters were classified according to their composition, as for Table 1.