Table 2.
Characteristics of 19 SNPs
| Gene | SNP | HGVS Names | ref SNP ID | Global MAF | Location | Chromosome position |
|---|---|---|---|---|---|---|
| DCK | SNP1 | NM_000788.2:c.-201C > T | rs2306744 | 0.060/130 | exon | 4:71859352 |
| SNP2 | NM_000788.2:c.207 + 9846A > G | rs12648166 | 0.458/998 | intron | 4:71873745 | |
| SNP3 | NM_000788.2:c.757-1205C > T | rs4694362 | 0.467/1015 | intron | 4:71893864 | |
| SNP4 | NM_000788.2:c.165C > T | rs4643786 | 0.227/494 | exon | 4:71895260 | |
| SNP5 | NM_000788.2:c.207 + 11338A > G | rs7684954 | 0.197/430 | intron | 4:71875237 | |
| SNP6 | NM_000788.2:c.666-346 T > C | rs936869 | 0.196/426 | intron | 4:71892036 | |
| SNP7 | NM_000788.2:c.92-1110 T > C | rs3775289 | 0.193/419 | intron | 4:71862674 | |
| CDA | SNP8 | NM_000788.2:c.266 + 3264A > G | rs1689924 | 0.482/1049 | intron | 1:20934796 |
| SNP9 | NM_000788.2:c.267-4159C > T | rs572529 | 0.350/761 | intron | 1:20936176 | |
| SNP10 | NM_000788.2:c.267-4087G > A | rs477155 | 0.279/606 | intron | 1:20936248 | |
| SNP11 | NM_000788.2:c.154 + 1015A > G | rs818202 | 0.480/1045 | intron | 1:20916791 | |
| SNP12 | NM_000788.2:c.155-7161G > A | rs818199 | 0.386/840 | intron | 1:20924260 | |
| SNP13 | NM_000788.2:c.266 + 1809G > A | rs10916827 | 0.345/752 | intron | 1:20933341 | |
| SNP14 | NM_000788.2:c.266 + 2751G > A | rs527912 | 0.349/759 | intron | 1:20934283 | |
| SNP15 | NM_000788.2:c.208G > A | rs60369023 | 0.002/4 | exon | 1:20931474 | |
| SLC29A1 | SNP16 | NM_001078174.1:c.30-549 T > C | rs324148 | 0.228/496 | intron | 6:44196578 |
| SNP17 | NM_001078174.1:c.1260-201A > G | rs760370 | 0.344/750 | intron | 6:44200953 | |
| SNP18 | NM_001078174.1:c.29 + 913C > T | rs9394992 | 0.290/631 | intron | 6:44195992 | |
| SNP19 | NM_001078174.1:c.-54-3077A > G | rs693955 | 0.189/411 | intron | 6:44191920 |
SNP, single-nucleotide polymorphism; rfID., reference SNP identification; HGVS Names, Human Genome Variation Societyname; MAF, minor allele frequency.