Table 1.
List of 60 genes that are expressed 3-fold and higher in the wild-type versus Δ bsaN mutant strains (p < 0.01)
| Gene locus ID | Gene | Protein description | Fold activation |
|---|---|---|---|
| T3SS3 associated |
|
||
| BPSS1512 |
tssM |
ubiquitin-specific proteinase |
9.3 |
| BPSS1513 |
|
|
7.5 |
| BPSS1514 |
folE |
GTP hydrolase |
5.1 |
| BPSS1515 |
|
|
9.0 |
| BPSS1516 |
bopC |
T3SS-3 effector |
48.2 |
| BPSS1518 |
|
transposase |
44.3 |
| BPSS1519 |
|
transposase |
10.1 |
| BPSS1523 |
bicP |
T3SS-3 chaperone |
149.0 |
| BPSS1524 |
bopA |
T3SS-3 effector |
269.4 |
| BPSS1525 |
bopE |
T3SS-3 effector |
51.7 |
| BPSS1526 |
bapC |
T3SS-3 effector |
5.9 |
| BPSS1527 |
bapB |
T3SS-3 effector |
6.8 |
| BPSS1528 |
bapA |
T3SS-3 effector |
7.6 |
| BPSS1529 |
bipD |
T3SS-3 translocon |
7.6 |
| BPSS1531 |
bipC |
T3SS-3 translocon |
6.3 |
| BPSS1532 |
bipB |
T3SS-3 translocon |
6.6 |
| BPSS1533 |
bicA |
T3SS-3 chaperone |
9.4 |
| T6SS1 apparatus |
|
||
| BPSS1497 |
tssB |
T6SS-1 |
3.1 |
| BPSS1498 |
hcp |
T6SS-1 |
11.3 |
| Actin based motility | |||
| BPSS1490 |
|
N-acetylmuramoyl-L-Ala-amidase |
13.5 |
| BPSS1491 |
|
ADP-heptose:LPS transferase |
8.8 |
| BPSS1492 |
bimA |
Bim actin polymerization protein |
7.8 |
| BPSS1493 |
|
|
14.5 |
| Polyketide biosynthesis | |||
| BPSL0472-BPSL0493 |
|
NRPKS/PKS biosynthesis locus |
3.0-4.3 |
| BPSL2883 |
|
Glyoxalase/bleomycin resistance protein/dioxygenase |
4.0 |
| Amino acid biosynthesis and sugar uptake |
|
||
| BPSL0196 |
metW |
methionine biosynthesis protein MetW |
4.2 |
| BPSL0197 |
metX |
homoserine O-acetyltransferase |
3.4 |
| BPSS1691 |
metZ |
O-succinylhomoserine sulfhydrylase |
3.2 |
| BPSS0005 |
kbl |
2-amino-3-ketobutyrate CoA ligase |
6.3 |
| BPSS0006 |
tdh |
L-threonine dehydrogenase |
5.5 |
| BPSL1793 |
|
Periplasmic binding protein (ribose binding) |
3.4 |
| Regulatory |
|
||
| BPSS1494 |
virG |
T6SS-1 response regulator |
22.4 |
| BPSS1495 |
virA |
T6SS-1 His kinase |
15.8 |
| BPSS1520 |
bprC |
T3SS-3 AraC-type regulator |
24.5 |
| BPSS1521 |
bprD |
T3SS-3 regulator |
151.5 |
| BPSS1522 |
bprB |
T3SS-3 response regulator |
89.5 |
| BPSS1530 |
bprA |
T3SS-3 HNS-type regulator |
6.9 |
| BPSL0480 | syrP | NPKS/PKS regulator | 3.9 |