Table 3.

DNA sequence 50 bp ahead and 50 bp behind the SNP, flanking the significantly associated SNPs (maizeGDB B73 reference sequence v2)

Gene model	Marker locus	DNA sequence 50 bp ahead the SNP	SNP alleles	DNA sequence 50 bp behind the SNP
GRMZM2G018027	S10_134718214	cgaacgactgcgacttgccggcgaagaacttggacaggcccctcctgcac	A/G	cccaaacaaagcagctgtggcgtcagatcaccgaaccaccgtacccccgc
	S10_134718555	tcctcctgctccttggcgcgcgcgaacaggacgtaggcctccattgcccc	C/T	aactcccaagcagatcacgcggaagaacgaacgaacaaacgatgtaagtg
	S10_134718584	gacgtaggcctccattgcccccaactcccaagcagatcacgcggaagaac	A/G	aacgaacaaacgatgtaagtggaacgatgaagtacgatgctctattgcgg
GRMZM5G856306	S10_136961730	gtgcgggaggccgccgcagagcacctcgaggagcggcaggctgactgggc	C/T	tactcccgccccgtcgtggcgctcgacctgctgtggaacctcgctttcat
GRMZM2G121790	S4_228661279	ctaacacattgtacttcagagcagctaaaaactagattatcttaagtatt	C/A	ttttaggtgctctataaaaaggctagacttacctttgacctttacccttt