Table 2. Number of individuals, haplotype designation, and genetic diversity for the sampled populations grouped according to geographical origin.
Group | N. Individuals (samples) | N. haplotypes | Distribution of Haplotypes (n) | Haplotype Diversity (Hd) | Nucleotide diversity (Pi) | Tajima's D test (p value) | Fu's Fs test (p value) |
H. armigera | |||||||
Pooled | 139 (14) | 31 | - | 0.821 | 0.0028 | −1.729 (<0.01) | −26.361 (<0.01) |
Winter cropping | 69 (6) | 19 | H1(22); H2(9); H3(21); H4(1); H5(1); H6(1); H7(1); H8(1); H9(1); H10(1); H11(1); H12(2); H13(2); H14(1); H15(1); H16(1); H17(1); H18(1); H19(1). | 0.805 | 0.0028 | −1.608 ( = 0.03) | −11.891 (<0.01) |
Summer cropping | 70 (8) | 19 | H1(22); H2(13); H3(11); H4(4); H12(4); H13(2); H14(1); H20(1); H21(1); H22(1); H23(1); H24(1); H25(2); H26(1); H27(1); H28(1); H29(1); H30(1); H31(1). | 0.835 | 0.0028 | −1.353 ( = 0.07) | −11.254 (<0.01) |
H. zea | |||||||
Pooled | 135 (16) | 20 | - | 0.420 | 0.0011 | −2.190 (<0.01) | −22.912 (<0.01) |
Winter cropping | 65 (8) | 11 | H1(50); H2(1); H3(1); H4(1); H5(3); H6(2); H7(1); H8(1); H9(1); H10(2); H11(2). | 0.408 | 0.0009 | −2.156 (<0.01) | −9.735 (<0.01) |
Summer cropping | 70 (8) | 13 | H1(53); H2(1); H5(1); H11(1); H12(1); H13(1); H14(2); H15(1); H16(1); H17(1); H18(2); H19(3); H20(2). | 0.427 | 0.0012 | −1.967 (<0.01) | −10.411 (<0.01) |